Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_G16
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z46676-9|CAA86665.2|  321|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U59212-1|AAB09671.1|  428|Caenorhabditis elegans transmembrane p...    27   9.4  
U39677-5|AAN71843.1|  383|Caenorhabditis elegans Innexin protein...    27   9.4  
U39677-4|AAN71842.1|  428|Caenorhabditis elegans Innexin protein...    27   9.4  

>Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical
           protein F52B11.1b protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 11  FTFQTFSGLPRIIEDQN*PNRSSRSRVLARLTDSNSFLYTYTYIDKLI 154
           + F+  SG PR +ED+  P R+  +R + +LT+S   +    +++KL+
Sbjct: 82  YFFEGPSGGPRSLEDEIKPKRAKINREVQKLTESEKNM--MAFLNKLV 127


>Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical
           protein F52B11.1a protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +2

Query: 11  FTFQTFSGLPRIIEDQN*PNRSSRSRVLARLTDSNSFLYTYTYIDKLI 154
           + F+  SG PR +ED+  P R+  +R + +LT+S   +    +++KL+
Sbjct: 201 YFFEGPSGGPRSLEDEIKPKRAKINREVQKLTESEKNM--MAFLNKLV 246


>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical protein
            F59A6.5 protein.
          Length = 1286

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 555  VHGTLESLHEVISQDMLPKELGGTGRSLKEIQDDWIDLLSSKETSE 418
            +HG  +S +E I  + +P E   T   L  + DD I++L   ETS+
Sbjct: 1173 LHGE-QSRNETIEWEKMPMEFIYTSPFLYIVHDDSIEILEISETSD 1217


>U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical
           protein C03F11.4 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = -3

Query: 609 LLRIITPLFNPKLVARFRVHGTLESLHEVISQDMLPKELGGTGRSLKEIQDDWIDLLSSK 430
           LL+I   L    L A FR+   L++L+E  S D    E+      +K  +DDW+++  + 
Sbjct: 228 LLKIYEDLIKRSLQA-FRLFMFLKTLNEK-SVDYTKFEVLTLSFVMKGFEDDWLEVNGTY 285

Query: 429 ETSEFFREINKAQVNEAYRMDDLKN 355
           E +E +    K  +++    D   N
Sbjct: 286 EENESYLSFEKNILHDIPETDQHVN 310


>Z46676-9|CAA86665.2|  321|Caenorhabditis elegans Hypothetical
           protein C08B11.7 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 480 RSLKEIQDDWIDLLSSKETSEFFREINKAQVNEAYRMDDLKNE 352
           + L+E+ ++ I    + E  E   ++NKA  +E Y+M+  + E
Sbjct: 224 QKLQEMMENLIQANENNELEEQIADLNKAIADEDYKMEMYRKE 266


>U59212-1|AAB09671.1|  428|Caenorhabditis elegans transmembrane
           protein protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 587 YSIQNWWPDSEFTERWSHYTK*Y 519
           Y IQ W P ++FT+ W  YT+ Y
Sbjct: 49  YPIQCWVP-AQFTDAWEQYTENY 70


>U39677-5|AAN71843.1|  383|Caenorhabditis elegans Innexin protein 1,
           isoform b protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 587 YSIQNWWPDSEFTERWSHYTK*Y 519
           Y IQ W P ++FT+ W  YT+ Y
Sbjct: 49  YPIQCWVP-AQFTDAWEQYTENY 70


>U39677-4|AAN71842.1|  428|Caenorhabditis elegans Innexin protein 1,
           isoform a protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 587 YSIQNWWPDSEFTERWSHYTK*Y 519
           Y IQ W P ++FT+ W  YT+ Y
Sbjct: 49  YPIQCWVP-AQFTDAWEQYTENY 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,941,844
Number of Sequences: 27780
Number of extensions: 342290
Number of successful extensions: 888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)