Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_G09
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z73905-2|CAA98109.3|  529|Caenorhabditis elegans Hypothetical pr...    29   4.5  
L15188-3|AAA27948.2|  348|Caenorhabditis elegans Hypothetical pr...    29   4.5  

>Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical
           protein Y7A9C.7 protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = +2

Query: 128 FIYYIXYLSFSKLILDAQLFIINHEYKFKKYILQLPAI--YTSDHKKLKLISFSVYCYLC 301
           F  +   +  S ++     ++     K  +  L  PA+  +    +    I  S  C+ C
Sbjct: 25  FAVFTSSILMSVVLFPLYAYVFKMNRKHDQETLLFPAVNHFYQMTRNTYFIYLSFICFFC 84

Query: 302 LSYTHKH 322
           L++THKH
Sbjct: 85  LTFTHKH 91


>Z73905-2|CAA98109.3|  529|Caenorhabditis elegans Hypothetical
           protein C32C4.1 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -2

Query: 591 ILIRII-LIQHPHAFL*NNFFTSI-AFEHTLLSRLTNLNFLSNNCYR*VIFFLAISY 427
           +++R++ +++    F    + TS+  F HTL S +T L+ LS      ++FF  I Y
Sbjct: 360 LVVRVLRVLRMARVFKLARYSTSLQTFGHTLQSSITELSMLSMFLITGIVFFSTIMY 416


>L15188-3|AAA27948.2|  348|Caenorhabditis elegans Hypothetical
           protein C14B9.3 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 263 LKLISFSVYCYLCLSYTHKHTSDVTF 340
           +KLIS  +Y YL   Y   H S +TF
Sbjct: 244 MKLISVVIYVYLMPQYMQYHQSSITF 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,283,087
Number of Sequences: 27780
Number of extensions: 270998
Number of successful extensions: 596
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)