Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F21
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.           33   0.71 
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.         33   0.71 
BX640924-1|CAE45962.1|  219|Homo sapiens hypothetical protein pr...    32   1.2  
BC001200-1|AAH01200.1| 1001|Homo sapiens Unknown (protein for IM...    30   3.8  
BC129991-1|AAI29992.1|  754|Homo sapiens PERQ1 protein protein.        30   5.0  
AY176044-1|AAO46888.1| 1035|Homo sapiens Grb10 interacting GYF p...    30   5.0  
AK125241-1|BAC86096.1|  569|Homo sapiens protein ( Homo sapiens ...    29   8.8  

>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
          Length = 1898

 Score = 32.7 bits (71), Expect = 0.71
 Identities = 26/102 (25%), Positives = 44/102 (43%)
 Frame = +1

Query: 31  LKRKLQFPVESNFRFTTAL*RVRNIPNVRQVQSR*QNGREERQPRELRSRGIQQRAQR*R 210
           L+R+ Q   E   R    L R + +   +Q++   Q  RE++  RE + R  Q+  +  +
Sbjct: 396 LRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQ 455

Query: 211 PHEIDVTRRRGRCAELESLQQLKNVSSTSVHER*NEHHMLHR 336
            HE +   +R +  + E    LK    T  HE+      L R
Sbjct: 456 KHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKR 497


>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
          Length = 1943

 Score = 32.7 bits (71), Expect = 0.71
 Identities = 26/102 (25%), Positives = 44/102 (43%)
 Frame = +1

Query: 31  LKRKLQFPVESNFRFTTAL*RVRNIPNVRQVQSR*QNGREERQPRELRSRGIQQRAQR*R 210
           L+R+ Q   E   R    L R + +   +Q++   Q  RE++  RE + R  Q+  +  +
Sbjct: 377 LRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQ 436

Query: 211 PHEIDVTRRRGRCAELESLQQLKNVSSTSVHER*NEHHMLHR 336
            HE +   +R +  + E    LK    T  HE+      L R
Sbjct: 437 KHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKR 478



 Score = 29.9 bits (64), Expect = 5.0
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 145 REERQPRELRSRGIQQRAQR*RPHEIDVTRRRGRCAELE-SLQQLKNVSSTSVHER 309
           RE+R+ R+LR+   QQR QR  P E +  +RR +  E E  LQ L+        ER
Sbjct: 791 REQRE-RQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRER 845


>BX640924-1|CAE45962.1|  219|Homo sapiens hypothetical protein
           protein.
          Length = 219

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -3

Query: 274 AAVVTPVLHTAPAAVSHQSRVDVISEPAVVSHEIATPLAAAPLAHSAIWTAPVA 113
           AA   P +   PAA +  +   V +EPA  +   A P A AP+       APVA
Sbjct: 122 AAPAAPPIAAEPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVGAEPAAEAPVA 175


>BC001200-1|AAH01200.1| 1001|Homo sapiens Unknown (protein for
           IMAGE:3356192) protein.
          Length = 1001

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 259 PVLHTAPAAVSHQSRVDVISEPAVVSHEIATPLAAAPLAHSAIWTAPVAHLGYS-GLFKG 83
           P   T P AV   +R  +     V S E A P    P +HS +  AP+  + YS GL +G
Sbjct: 692 PSCFTCPVAVDATTREVLPGALQVCSSEPAEPPGTPPASHSHLDAAPLPTVVYSKGLQRG 751


>BC129991-1|AAI29992.1|  754|Homo sapiens PERQ1 protein protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 115 RQVQSR*QNGREERQPRELRSRGIQQRAQR*RPHEIDVTRRR 240
           R+V+ R +   EER+ RE + R  QQ  Q+ R  E ++ RR+
Sbjct: 408 REVELRAKREEEERKRREEKRRQQQQEEQKRRQEEEELFRRK 449


>AY176044-1|AAO46888.1| 1035|Homo sapiens Grb10 interacting GYF
           protein 1 protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 115 RQVQSR*QNGREERQPRELRSRGIQQRAQR*RPHEIDVTRRR 240
           R+V+ R +   EER+ RE + R  QQ  Q+ R  E ++ RR+
Sbjct: 689 REVELRAKREEEERKRREEKRRQQQQEEQKRRQEEEELFRRK 730


>AK125241-1|BAC86096.1|  569|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43251 fis, clone HEART2006131, weakly  similar
           to Mus musculus 2-hydroxyphytanoyl-CoA lyase
           (Hpcl-pending). ).
          Length = 569

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -3

Query: 415 SHQSRVDVHSSPAVVTHAISPLSALWTGATYGAHSISHGHLLKKRSLAAVVTPV 254
           S   + +VH + A++ HA SPL  +  GA Y         L++K     + TP+
Sbjct: 191 SMADQTNVHQAVALLKHAKSPLIVIGKGAAYARAENEIRALVEKTQAPFLPTPM 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,566,887
Number of Sequences: 237096
Number of extensions: 1340193
Number of successful extensions: 3835
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3831
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)