Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F13
         (324 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0006 + 16257288-16259522                                         28   1.5  
06_03_0084 - 16386962-16387033,16387124-16387175,16387252-163873...    27   4.5  
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544...    27   4.5  
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130...    26   5.9  

>03_04_0006 + 16257288-16259522
          Length = 744

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 318 NSAGRWRSFIIDIP*T-WSTAISRVNSAATQPTPTASQPSG 199
           NS   W +F  D P   WST ++   +AA +P    + P G
Sbjct: 687 NSTPAWTTFATDDPNAQWSTLVTTKEAAAYRPACPYAHPDG 727


>06_03_0084 -
           16386962-16387033,16387124-16387175,16387252-16387313,
           16387509-16387543,16387637-16387679,16388610-16388692,
           16388829-16388917,16390415-16390681,16391370-16391446,
           16391546-16391677,16391802-16391870,16392464-16392529,
           16392603-16392773,16392848-16392916,16393005-16393086,
           16393175-16393219,16393535-16393659,16394271-16394525,
           16396561-16396722
          Length = 651

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 264 TAISRVNSAATQPTPTASQPSGEGRKGSDVQSY 166
           ++I  ++ AA   T  +SQPSG   +  ++QSY
Sbjct: 572 SSIEEISDAADASTTGSSQPSGVHFREKELQSY 604


>01_05_0474 -
           22552599-22552687,22553494-22553631,22553766-22554447,
           22555120-22555167,22555395-22556042,22556960-22557310,
           22558622-22558690
          Length = 674

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = -1

Query: 258 ISRVNSAATQPTPTASQPSGEGRKGSDVQSYKYTESFSFRDGLQPSNRSRTS 103
           +SRV++  + PTP A +P     K S +  +  ++     + L+PS R RT+
Sbjct: 382 LSRVHADLSTPTPIAPRPRTSKMKFSPLGHFTLSDP-KHPNVLEPSFRRRTA 432


>03_01_0161 +
           1307206-1307769,1307979-1308101,1308182-1308286,
           1308688-1308867,1308988-1309050,1309151-1309345,
           1309704-1309805,1309885-1309947,1310045-1310113,
           1310215-1310270,1310587-1310755
          Length = 562

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 255 SRVNSAATQPTPTASQPSGEGR 190
           SRV+SAA  P+P++S P+   R
Sbjct: 26  SRVSSAAPHPSPSSSAPTPASR 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,621,915
Number of Sequences: 37544
Number of extensions: 100192
Number of successful extensions: 337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)