Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F13
         (324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-511|AAF45862.2|  903|Drosophila melanogaster CG32498-PM...    28   3.2  
BT010246-1|AAQ23564.1|  583|Drosophila melanogaster RE42568p pro...    27   7.3  
AE014297-4251|AAF56804.2|  668|Drosophila melanogaster CG9988-PA...    27   7.3  

>AE014298-511|AAF45862.2|  903|Drosophila melanogaster CG32498-PM,
           isoform M protein.
          Length = 903

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
 Frame = -1

Query: 273 TWSTAISRVNSAATQPTPTASQPSGEGRK----GSDVQSYKYTESFSFRDGLQPSNRSRT 106
           T +T  +      T PTPTA   +   R      + V+  K  +  SF D  Q   ++ T
Sbjct: 28  TTATRAATTTPVTTAPTPTAITTTYRSRNLLKATAKVKKKKKWKQISFVDDQQRLKQAAT 87

Query: 105 SAGRKKN 85
           SA RK++
Sbjct: 88  SAERKRS 94


>BT010246-1|AAQ23564.1|  583|Drosophila melanogaster RE42568p
           protein.
          Length = 583

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 174 EHHCLCVLHQRVEKRWA 224
           EH C CV ++R++ +WA
Sbjct: 446 EHFCTCVPYKRLDTQWA 462


>AE014297-4251|AAF56804.2|  668|Drosophila melanogaster CG9988-PA
           protein.
          Length = 668

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 174 EHHCLCVLHQRVEKRWA 224
           EH C CV ++R++ +WA
Sbjct: 531 EHFCTCVPYKRLDTQWA 547


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,105,493
Number of Sequences: 53049
Number of extensions: 169778
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)