Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F10
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    28   0.11 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    28   0.11 
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    24   1.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.4  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.4  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   4.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   7.2  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 693 RNYYYLHYFAHNLKQNQLYNRTIITSIEMVIKF 595
           R  YYLH FA        YN  ++  ++ V++F
Sbjct: 179 RQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRF 211


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 693 RNYYYLHYFAHNLKQNQLYNRTIITSIEMVIKF 595
           R  YYLH FA        YN  ++  ++ V++F
Sbjct: 179 RQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRF 211


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 690 NYYYLHYFAHNLKQNQLYNRTIITSIEMV 604
           NY Y +Y  +N    +LY +  I +IE +
Sbjct: 88  NYKYSNYNNYNNYNKKLYYKNYIINIEQI 116


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -2

Query: 652 TKSTL*QNNYYKH*NGNKIYSKLIKYAKNN*NFLVMSSENIPGSYFLEPKHPL 494
           +  T+  NN YK+   N  Y+   K    N N++      +P  Y   P  P+
Sbjct: 86  SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPM 138


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -2

Query: 652 TKSTL*QNNYYKH*NGNKIYSKLIKYAKNN*NFLVMSSENIPGSYFLEPKHPL 494
           +  T+  NN YK+   N  Y+   K    N N++      +P  Y   P  P+
Sbjct: 86  SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPM 138


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -2

Query: 652 TKSTL*QNNYYKH*NGNKIYSKLIKYAKNN*NFLVMSSENIPGSYFLEPKHPL 494
           +  T+  NN YK+   N  Y+   K    N N++      +P  Y   P  P+
Sbjct: 86  SNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYYGNFPPRPM 138


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 316 IPTLYLVFQTKISSMHALLSRQDLYKINK 402
           +P++YL +   I   +  ++ Q+ YK+ K
Sbjct: 42  VPSIYLTYAKNILPNNISIAGQNTYKVAK 70


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 544 TLLGNFNYS*HILSVCYKFYYHFN 615
           T+  N NY  +  + C K YY+ N
Sbjct: 89  TIHNNNNYKYNYNNNCKKLYYNIN 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,299
Number of Sequences: 438
Number of extensions: 3695
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)