Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F07
         (725 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CEQ9 Cluster: Chromosome undetermined scaffold_172, w...    35   2.4  
UniRef50_Q5VRW0 Cluster: Putative uncharacterized protein P0013F...    34   3.1  
UniRef50_Q22070 Cluster: Putative uncharacterized protein plc-3;...    33   7.2  
UniRef50_A4FYZ2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_A0CEQ9 Cluster: Chromosome undetermined scaffold_172,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_172,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 209

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = -1

Query: 623 PLREIWEQ---VKELLKDVLHILYEYLKTFEVSDY-IRAYEIFIACSSNTKKQFIMELTE 456
           PL+  W+    +K+L+   +HIL   ++  +V D   R Y +   C+S T   F+ +  +
Sbjct: 23  PLKSKWQSKFYLKQLIDHYIHILQSIVRIIDVYDQGTRVYVVQEFCNSGTLFDFMKKKPQ 82

Query: 455 FIGNHLSRQM 426
           ++G+ L +++
Sbjct: 83  YMGDTLQKKV 92


>UniRef50_Q5VRW0 Cluster: Putative uncharacterized protein
           P0013F10.19; n=3; Oryza sativa|Rep: Putative
           uncharacterized protein P0013F10.19 - Oryza sativa
           subsp. japonica (Rice)
          Length = 1093

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = -1

Query: 725 TTASTYXIRLTIGNLNEFGRPMGGAAGF---STSRVVPLREIWEQVKELLKDVLHILYEY 555
           TT S     +T+G +   G   GGAA F   +  R V   E+W +      + L + Y Y
Sbjct: 458 TTFSATRRSITVGQITSIG---GGAAHFPPLTFQRTVHPMELWSRFGVTGGEPLSLAYSY 514

Query: 554 LKTFEVSDYIRAYEIF 507
            KT +  +++R  E F
Sbjct: 515 TKTKQAGEFLRRSEPF 530


>UniRef50_Q22070 Cluster: Putative uncharacterized protein plc-3;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein plc-3 - Caenorhabditis elegans
          Length = 1299

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -1

Query: 596 KELLKDVLHILYEYLKTFEVSDYIRAYEIFIACSSNTKKQFIMELTEFIGNHLSRQ 429
           K LL+DVLH++  Y   F  S+Y     I   CS   ++    EL + +G++L  Q
Sbjct: 375 KILLRDVLHVIRHY--AFVTSEYPVILSIEDNCSVPAQRLLAQELKDILGDYLLTQ 428


>UniRef50_A4FYZ2 Cluster: Putative uncharacterized protein; n=1;
           Methanococcus maripaludis|Rep: Putative uncharacterized
           protein - Methanococcus maripaludis
          Length = 561

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
 Frame = -1

Query: 620 LREIWEQVKELLKDVLHILY-EYLKTFEVSDYIRAYEIFI----ACSSNTKKQFIMELTE 456
           L+ ++E+  +  +D   ILY EYLKT ++ +Y++ +  FI        N K +   E TE
Sbjct: 247 LKYLFEETNKKYEDFEGILYNEYLKTSDLENYVKLHAYFIDFYYEILKNPKIKTNDEYTE 306

Query: 455 FIGNHL 438
           ++ N+L
Sbjct: 307 YLINNL 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,772,948
Number of Sequences: 1657284
Number of extensions: 13253162
Number of successful extensions: 28311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28309
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)