Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F07
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    29   3.4  
AC103567-10|AAL35727.1|  159|Caenorhabditis elegans Hypothetical...    28   5.9  

>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
           protein T01E8.3 protein.
          Length = 1299

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -1

Query: 596 KELLKDVLHILYEYLKTFEVSDYIRAYEIFIACSSNTKKQFIMELTEFIGNHLSRQ 429
           K LL+DVLH++  Y   F  S+Y     I   CS   ++    EL + +G++L  Q
Sbjct: 375 KILLRDVLHVIRHY--AFVTSEYPVILSIEDNCSVPAQRLLAQELKDILGDYLLTQ 428


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -1

Query: 704 IRLTIGNLNEFGRPMGGAAGFSTSRVVPLREIWEQVKELLKDVLHILYEYLK 549
           I L IGN   FG+  G A GF  + +  L ++   ++   +++LH L  +++
Sbjct: 559 IILAIGNYLNFGKRNGNAYGFEMASINKLADVKNALRN-DRNLLHFLVNFIE 609


>AC103567-10|AAL35727.1|  159|Caenorhabditis elegans Hypothetical
           protein Y51F10.1 protein.
          Length = 159

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 568 ICRTSFNSSFTCSHISR 618
           ICR +FNS+ TCS I R
Sbjct: 69  ICRRAFNSTVTCSKIKR 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,682,895
Number of Sequences: 27780
Number of extensions: 325308
Number of successful extensions: 669
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)