Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F02
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   4.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   6.0  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 26  VYLMFNT*RNVLQNNVVDVV 85
           VY  FN+ RNV Q+   D++
Sbjct: 97  VYFSFNSVRNVQQHTFADLI 116


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 477 FICHR*EYKIVKKNMINNFFSFDGQYYLF 391
           F C++ +Y  V K+M+N+        Y +
Sbjct: 259 FQCNKCDYTCVNKSMLNSHMKSHSNVYRY 287


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 477 FICHR*EYKIVKKNMINNFFSFDGQYYLF 391
           F C++ +Y  V K+M+N+        Y +
Sbjct: 17  FQCNKCDYTCVNKSMLNSHMKSHSNVYRY 45


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 302 LDYMTTNYFQIH-TF*LWFYFYCDISSKMLKICISIGFY 189
           L+++     ++H TF  W   Y  ++S     C S+ FY
Sbjct: 43  LNHLNEEPEKLHFTFKSWKVLYTSLTSFGYLFCASLSFY 81


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 164 LLLKYIWRNKNLLKYIFSTFYY*YHNKNRTITRKYVF 274
           + L YI     LL YI+S  Y  + +KN    + ++F
Sbjct: 1   MFLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLF 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,338
Number of Sequences: 336
Number of extensions: 4031
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)