Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_F02
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.     65   6e-11
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...    65   6e-11
Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    58   9e-09
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    52   3e-07
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    45   5e-05
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    45   5e-05
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...    33   0.16 
AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical ...    31   0.86 
U46753-11|AAM98048.1|  425|Caenorhabditis elegans Dishevelled re...    28   8.0  
U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled re...    28   8.0  

>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           EVI GWD GV+ M VG K K+     + YG +G PP IP N+TLVFEVEL  V
Sbjct: 55  EVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           EVI GWD GV+ M VG K K+     + YG +G PP IP N+TLVFEVEL  V
Sbjct: 55  EVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -1

Query: 738 VISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           VI GWD G+  M VG +R +  PP + YG +G+PP IP NS L F+VEL  +
Sbjct: 81  VIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKI 132


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           +VI G D  + GM  G KRK++ PP +AYG  G PP IP NS L F++ L+ +
Sbjct: 201 QVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           EVI G +  + GM VG +RK+I PP   +   G   V     TL + VELK++
Sbjct: 82  EVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDGD-EVEGKGETLYYFVELKSI 133


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = -1

Query: 744 KEVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           +EVI G D  + GM  G +R+++ P    YG++GSPP IP  + L FE+ L+ +
Sbjct: 200 REVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253



 Score = 31.1 bits (67), Expect = 0.86
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPP--GMAYGAKGSP 637
           +VI G D  + GM +G  RK++ PP  G A  + G P
Sbjct: 86  QVIPGMDRAMRGMCIGEIRKVVIPPKLGFAKDSTGQP 122


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 24/49 (48%), Positives = 28/49 (57%)
 Frame = -1

Query: 738 VISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVEL 592
           VI GWD GV+ M  G   +        YG  GSPP IP  +TL+FEVEL
Sbjct: 69  VIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           EVI G D  ++GM  G +R+++ P    YG  G  P IP  + L F++ L+ +
Sbjct: 206 EVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258



 Score = 35.5 bits (78), Expect = 0.040
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 592
           +VI G +  ++GM  G KRK++ P  + +G KG     I  + TL + V+L
Sbjct: 84  QVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 134


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNV 583
           EVI G D  ++GM  G +R+++ P    YG  G  P IP  + L F++ L+ +
Sbjct: 242 EVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294



 Score = 35.5 bits (78), Expect = 0.040
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 592
           +VI G +  ++GM  G KRK++ P  + +G KG     I  + TL + V+L
Sbjct: 120 QVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 170


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 586
           EVI G D G+  MKVG            YG  G   +IP N++L  +V L N
Sbjct: 137 EVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRLFN 188



 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -1

Query: 741 EVISGWDXGVSGMKVGGKRKIICPPGMAYGAKGSPPVIP 625
           EVI GWD GV+ M V  K K+   P   +     P  IP
Sbjct: 251 EVIKGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289


>AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical
           protein C46E10.2 protein.
          Length = 123

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 116 LHKFGNTCMKT*DSIMLLLKYIWRNKNLLKYIFSTFYY 229
           +H  GN   K   +++++L YI+   NL++++F   Y+
Sbjct: 86  IHLIGNRISKKQSTLLIILSYIFPVYNLVRFLFKASYF 123


>U46753-11|AAM98048.1|  425|Caenorhabditis elegans Dishevelled
           related protein 1,isoform b protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 726 WDXGVSGMKVGGKRKIICPPGMAYGAKGSPP 634
           W  G++GM  G    ++ PP    G    PP
Sbjct: 372 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 402


>U46753-10|AAM98049.1|  623|Caenorhabditis elegans Dishevelled
           related protein 1,isoform c protein.
          Length = 623

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 726 WDXGVSGMKVGGKRKIICPPGMAYGAKGSPP 634
           W  G++GM  G    ++ PP    G    PP
Sbjct: 504 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 534


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,166,618
Number of Sequences: 27780
Number of extensions: 332610
Number of successful extensions: 713
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)