Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_E22
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC091125-2|AAK27887.2|  202|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z81533-9|CAB04341.1|  307|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF016682-2|AAO38604.1|  891|Caenorhabditis elegans Argonaute (pl...    28   6.6  
AF016682-1|AAB66187.2|  910|Caenorhabditis elegans Argonaute (pl...    28   6.6  
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr...    28   8.8  
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik...    28   8.8  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    28   8.8  

>AC091125-2|AAK27887.2|  202|Caenorhabditis elegans Hypothetical
           protein Y67D2.5 protein.
          Length = 202

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 742 EPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIR 626
           EP  + K+ K  +NE I ++    Q +LD+E E+++T R
Sbjct: 20  EPCHVAKYHKWMENEEIRRLTGSEQLSLDEEYEMQKTWR 58


>Z81533-9|CAB04341.1|  307|Caenorhabditis elegans Hypothetical
           protein F36G9.14 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
 Frame = -3

Query: 748 IKEPRLLIKHVKMCDNELINKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVL-- 575
           IK   ++++ V   +   I K+    +  +DQ  +L ETIR     +D I    TT+   
Sbjct: 7   IKVVNIIMEKVDPIERLTIRKVSRKLRILIDQISDLFETIR-----ID-IENTLTTIYLN 60

Query: 574 -QVIHYNEAGISPACGKARLLFEKAHDGYA 488
            + I Y E GI    GK +++  + H G A
Sbjct: 61  NRNIFYKENGIVEFDGKRKVIEGELHTGMA 90


>AF016682-2|AAO38604.1|  891|Caenorhabditis elegans Argonaute
           (plant)-like gene protein2, isoform b protein.
          Length = 891

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 IICANASTPLKYDVKKIEEVVYDLSXQGAAATRAMRTTDQ 19
           ++     TP+  +VK++ + V  ++ Q   A  A+RTT Q
Sbjct: 549 VVVLPGKTPIYAEVKRVGDTVLGIATQCVQAKNAIRTTPQ 588


>AF016682-1|AAB66187.2|  910|Caenorhabditis elegans Argonaute
           (plant)-like gene protein2, isoform a protein.
          Length = 910

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 IICANASTPLKYDVKKIEEVVYDLSXQGAAATRAMRTTDQ 19
           ++     TP+  +VK++ + V  ++ Q   A  A+RTT Q
Sbjct: 568 VVVLPGKTPIYAEVKRVGDTVLGIATQCVQAKNAIRTTPQ 607


>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
           protein F48F7.1 protein.
          Length = 1002

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 IICANASTPLKYDVKKIEEVVYDLSXQGAAATRAMRTTDQ 19
           ++     TP+  +VK++ + V  ++ Q   A  A+RTT Q
Sbjct: 662 VVVLPGKTPVYAEVKRVGDTVLGIATQCVQAKNAIRTTPQ 701


>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
           protein F48F7.1 protein.
          Length = 1002

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 IICANASTPLKYDVKKIEEVVYDLSXQGAAATRAMRTTDQ 19
           ++     TP+  +VK++ + V  ++ Q   A  A+RTT Q
Sbjct: 662 VVVLPGKTPVYAEVKRVGDTVLGIATQCVQAKNAIRTTPQ 701


>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
           protein.
          Length = 1010

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 138 IICANASTPLKYDVKKIEEVVYDLSXQGAAATRAMRTTDQ 19
           ++     TP+  +VK++ + V  ++ Q   A  A+RTT Q
Sbjct: 670 VVVLPGKTPVYAEVKRVGDTVLGIATQCVQAKNAIRTTPQ 709


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 715  KMCDNELINKIFSDFQKNLDQEQELRE--TIRTICKEVD 605
            KM D E   K   D QKN+DQEQE  E  T   + KE D
Sbjct: 3719 KMWDEE--EKEEQDQQKNMDQEQEAAEDQTDEMVAKEDD 3755


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,492,491
Number of Sequences: 27780
Number of extensions: 352188
Number of successful extensions: 1079
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)