Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E22
(789 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g37020.1 68415.m04540 translin family protein similar to SP|Q... 127 1e-29
At2g03780.1 68415.m00338 translin family protein similar to SP|Q... 55 6e-08
At1g68100.1 68414.m07779 IAA-alanine resistance protein 1, putat... 31 0.66
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 30 1.5
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 30 1.5
At4g27460.1 68417.m03946 CBS domain-containing protein 30 2.0
At5g44290.1 68418.m05421 protein kinase family protein contains ... 29 2.7
At5g51795.1 68418.m06422 Kin17 DNA-binding protein-related 29 3.5
At5g41760.1 68418.m05084 nucleotide-sugar transporter family pro... 28 6.1
>At2g37020.1 68415.m04540 translin family protein similar to
SP|Q62348 Translin {Mus musculus}; contains Pfam profile
PF01997: Translin family
Length = 238
Score = 127 bits (306), Expect = 1e-29
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Frame = -3
Query: 694 INKIFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNEAGISPACGKARLL 515
+ K F F+ L++ LRE IR + E++ +R L ++H + I KA+
Sbjct: 12 LEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQSRP-IPEVIEKAKEK 70
Query: 514 FEKAHDGYARLKDAVP--PTDYFKYQDHWRFMTQRYCYLIALTIWLEKGILASHETMAEI 341
Y RL + + P Y++Y WR TQ +A WLE G L H E
Sbjct: 71 IVDLKQYYGRLAEILEECPGQYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTEAEEK 130
Query: 340 LGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPLRISKFVMELNAGF 161
LG++ +E F L+ EDYL G+ M ++L R VN VT GDY+ P ++ F+ +L+A F
Sbjct: 131 LGLNSLE----FGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLHAAF 186
Query: 160 RLLNLKNDHLRKRFDATK 107
R+LNL+ND LRK+FD+ K
Sbjct: 187 RMLNLRNDFLRKKFDSMK 204
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -1
Query: 111 LKYDVKKIEEVVYDLSXQG 55
+KYD++++EEV YD+ +G
Sbjct: 203 MKYDLRRVEEVYYDVKIRG 221
>At2g03780.1 68415.m00338 translin family protein similar to
SP|Q99598 Translin-associated protein X
(Translin-associated factor X) {Homo sapiens}; contains
Pfam profile PF01997: Translin family
Length = 287
Score = 54.8 bits (126), Expect = 6e-08
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Frame = -3
Query: 730 LIKHVKMCDNELINK-IFSDFQKNLDQEQELRETIRTICKEVDQISREATTVLQVIHYNE 554
L+K + E K FS + L+ E RE + + +++ S++ + QV ++
Sbjct: 37 LVKKARTMSTESSMKDAFSTYADYLNNFNEKRERVVKVSRDITMNSKKV--IFQVHRLSK 94
Query: 553 AGISPACGKARLLFEKAHDG-YARLKDAVPPTDYFKYQDHWRFMTQRYCYLIALTIWLEK 377
KA E D +ARL + TD++K + + Q Y +
Sbjct: 95 DNKEEVLEKAGKDLEAVRDQHFARLMKELQGTDFWKLRRAYSPGVQEYVEAATFYKFCLS 154
Query: 376 GILAS-HETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSVTRGDYERPL 200
G L + E ++ +S L E ++I DY++GL + EL R+A+ ++ G+ E
Sbjct: 155 GTLCTLDEINTTLVPLSDPSL-EPLQINILDYILGLADLTGELMRMAIGRISDGEIEFAQ 213
Query: 199 RISKFVMELNAGFRLLNLKND 137
RI +FV +++ L+ K D
Sbjct: 214 RICQFVRQIHRELMLVVPKMD 234
>At1g68100.1 68414.m07779 IAA-alanine resistance protein 1,
putative similar to IAA-alanine resistance protein 1
[Arabidopsis thaliana] SWISS-PROT:Q9M647; contains ZIP
Zinc transporter domain, Pfam:PF02535; identical to
cDNA IAA-alanine resistance protein 1 mRNA GI:6942042
Length = 469
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 64 HXGGCCHKGDADHGPEHEH 8
H GGC H D DH +H+H
Sbjct: 41 HGGGCSHSHDHDHDHDHDH 59
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IHRGPSQKVDELCHMPEKCRLHCSVL--LGALWSLPEI 600
+H G + KVD L + + C L C V LGA W++ ++
Sbjct: 128 VHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADV 165
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 493 IHRGPSQKVDELCHMPEKCRLHCSVL--LGALWSLPEI 600
+H G + KVD L + + C L C V LGA W++ ++
Sbjct: 157 VHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADV 194
>At4g27460.1 68417.m03946 CBS domain-containing protein
Length = 391
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = -3
Query: 370 LASHETMAEILGVSPVE-LKEGFHLDIEDY-LIGLLTMCSELSRLAVNSVTRGDYERPLR 197
L++ + MA I G +P E L + +ED LIGL+++ LS + +S + E P+R
Sbjct: 258 LSAGDLMAYIDGANPPESLVQIVRNRLEDKGLIGLMSLFDSLSSYSTSSGYSSEEEAPVR 317
Query: 196 ISKFVMELNAGFRL 155
+ + +++ R+
Sbjct: 318 TTSYGRSMSSSARM 331
>At5g44290.1 68418.m05421 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -2
Query: 230 CDPRRL-RAPPE---DLQVRDGTERRLQVIELEERSFAQTLRRH 111
CDP L + PP D ++RD +R+ E ER +QT R H
Sbjct: 428 CDPSSLPKYPPSKEIDAKIRDDAKRQRPTQEKHERQDSQTRRSH 471
>At5g51795.1 68418.m06422 Kin17 DNA-binding protein-related
Length = 347
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 364 SHETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLAVNSV 227
SH+ ++LG +P + G+ + E + L+ SR+A V
Sbjct: 65 SHQRQMQVLGQNPTRVVNGYSQEFEQTFLDLMRRSHRFSRVAATVV 110
>At5g41760.1 68418.m05084 nucleotide-sugar transporter family
protein low similarity to SP|Q61420 CMP-sialic acid
transporter {Mus musculus}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 340
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 388 WLEKGILASHETMAEILGVSPVELKEGFHLDIEDYLIGLLTMCSELSRLA 239
W+ G+LA T +++ G F I+ YL+G+L+ + LS LA
Sbjct: 134 WMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILS--AGLSALA 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,534,992
Number of Sequences: 28952
Number of extensions: 328447
Number of successful extensions: 887
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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