Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_E21
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0040 + 20162923-20163255                                         34   0.12 
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176...    32   0.62 
04_03_0922 + 20834195-20836603                                         31   0.82 
01_06_1270 + 35886571-35886573,35886676-35886708,35887073-358872...    30   1.9  
09_06_0032 + 20353789-20353963,20354240-20354340,20354426-203545...    28   7.6  

>03_05_0040 + 20162923-20163255
          Length = 110

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = +1

Query: 490 SSFQLLWLALALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELA 669
           +SF L+  ALA++  SIS +V   +  I S  L+A + +S I   +    S+V L AE+ 
Sbjct: 5   TSFVLVLSALAIMTISISVAVTIVISTIVSTILVARLSVSGIVLVLLLPPSAVQLVAEIV 64

Query: 670 SSLI 681
           S LI
Sbjct: 65  SILI 68


>02_01_0267 -
           1766071-1766261,1766368-1766569,1766719-1766814,
           1767414-1767560,1767635-1767800,1767907-1767973,
           1772850-1772949,1773029-1773099,1773199-1773382,
           1773784-1773929,1774484-1774663,1774737-1774824,
           1775634-1775838,1775945-1776081,1776529-1776612,
           1776718-1776894,1777050-1777194,1777642-1777763,
           1777846-1778091,1778571-1778789,1779016-1779094,
           1779178-1779257,1779291-1779320
          Length = 1053

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 20/76 (26%), Positives = 42/76 (55%)
 Frame = -2

Query: 791 GVPLSSYMEDLLTNXISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSI 612
           G  + +  E+L  N +S N  + ++  E VI   D++   L +   +S ++ L+ +K S+
Sbjct: 644 GKKIETRKEELKAN-LSTNLMRRQKEFEAVISSADSKTLSLEA---ESKEQELNSSKSSL 699

Query: 611 DDITTSARRSMDDISS 564
           DD+T   + ++D I++
Sbjct: 700 DDLTAMLKANVDAINN 715


>04_03_0922 + 20834195-20836603
          Length = 802

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 568 EISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNFP 699
           E+SSI L+  + +  +  F CDN+S +L+   + +  + V  FP
Sbjct: 547 EVSSIGLIQHINLIKLIGFCCDNDSKLLVYEHMPNRSLDVHLFP 590


>01_06_1270 +
           35886571-35886573,35886676-35886708,35887073-35887235,
           35887307-35887437,35887593-35887730,35887814-35887912,
           35888103-35888339
          Length = 267

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -1

Query: 516 CQPEELKRGVICMPLQYIYRKRTALMTCHVHLCPSLFIIDMIYLITI 376
           C+  E+++ V   P  YIYR +  L TCH  L  SL I   ++ +T+
Sbjct: 148 CKDPEMRKQVRSNP--YIYRGKLPLKTCHELLMVSLDIEKNLHEVTL 192


>09_06_0032 +
           20353789-20353963,20354240-20354340,20354426-20354560,
           20354633-20354714,20354829-20354896,20354984-20355073,
           20355133-20355257,20355384-20355717,20355841-20355957,
           20356058-20356485,20356564-20356813,20356944-20357194,
           20357278-20357587
          Length = 821

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -2

Query: 701 IGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKL 528
           I + + E+K  AS++C S  E+L +  + I ++    +  M+      +S LD+  K+
Sbjct: 339 IARLENELKFPASASCTSHAEILREKDELIKNLEEQLKELMEQ-KDTVQSQLDNFRKV 395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,831,756
Number of Sequences: 37544
Number of extensions: 341066
Number of successful extensions: 892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)