Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_E12
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.69 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   3.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.8  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 468 QNTKVNIRESLYRPRAPGSQRAGRRSAKR 382
           QN K+   +  Y P A G +  G+ SAKR
Sbjct: 182 QNEKITKLKINYNPFAKGFRENGKSSAKR 210


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -2

Query: 504 QDAQRNGQHKLGQNTKVNIRESLYRPRAPGSQRAGRRSAKRTSQAN*LRASVKYVGAI 331
           ++A+   + K   N   N+R+ +    A   +   R   K+ S+   LR +V+Y+ ++
Sbjct: 57  RNARERNRVKQVNNGFANLRQHIPNFIAAAFESNSRGGNKKLSKVETLRMAVEYIRSL 114


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = -3

Query: 554 CSLTPVAAELNSTCRCPKTHSETDNISSDRIQKLILESRYIDLEPLEVNAQGDVQQ 387
           CS    A  LN    CPK       +S      L   ++Y+ +E +E     ++++
Sbjct: 719 CSPDLYAVMLNCWKECPKNRPTFTELSKSLEGLLENVAQYLQIENVEQTLNHEIKK 774


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 157 CILYFNTI*FGARXIRYSVS 216
           C++ FNTI F      YS+S
Sbjct: 542 CLIQFNTIVFAFCYCYYSIS 561


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,845
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)