Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E12
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0828 - 6679393-6680432,6680448-6680784 31 0.57
05_04_0111 - 18079051-18079970,18080384-18080462 31 0.75
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 30 1.3
11_04_0470 - 18092681-18092695,18092725-18092811,18093528-180935... 30 1.7
08_02_0009 + 11216532-11218687,11220727-11225998 30 1.7
08_02_0007 + 11208170-11210325,11210367-11210403 30 1.7
08_02_0003 + 11180421-11180757,11180773-11185715 30 1.7
06_01_0223 - 1709897-1709912,1710188-1712520 30 1.7
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 30 1.7
01_01_0100 - 755894-756662,757086-757598,758718-761050 30 1.7
09_04_0085 + 14441123-14443507,14443731-14443787 29 2.3
08_02_0011 - 11234393-11235348,11235364-11235700 29 2.3
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 29 2.3
08_02_0002 + 11173365-11173512,11173528-11178470 29 2.3
08_02_0001 + 11166161-11166488,11166504-11167390 29 2.3
07_01_0376 + 2815419-2815755,2815912-2817659 29 4.0
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 28 5.3
10_08_0897 - 21419639-21420633,21420826-21421153 28 5.3
10_01_0164 + 1863890-1866253 27 9.2
>07_01_0828 - 6679393-6680432,6680448-6680784
Length = 458
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNT--I*FGARX-IRYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I++ + I F R + +S + K N
Sbjct: 203 NRSASKYKINVNDVIENMHS-KGIIFMSPLKISFEERAGEEWKISDLIESKTLSQPENYI 261
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 262 SYQNSKGNTSIRFINYKPKTT 282
>05_04_0111 - 18079051-18079970,18080384-18080462
Length = 332
Score = 31.1 bits (67), Expect = 0.75
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K + N
Sbjct: 70 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLNQPENYI 128
Query: 262 LLMSLNGNIVINFSNYPPS-----ETARDSADIFHRRTESI 369
+ GN I F NY P ET +I +R SI
Sbjct: 129 SYQNSKGNTSIRFINYKPRTTDDLETEASDRNIIDKRRHSI 169
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 156 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 214
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 215 SYQNSKGNTSIRFINYKPKTT 235
>11_04_0470 -
18092681-18092695,18092725-18092811,18093528-18093593,
18093696-18093740,18093850-18093903,18093987-18094082,
18094161-18094241,18095634-18095714,18095798-18095884,
18095976-18096074,18096644-18096769,18098162-18098248,
18098321-18098389,18098711-18098806,18099053-18099169,
18099710-18099790,18099873-18100010,18100307-18100580,
18100735-18100830,18101612-18101757,18102883-18103141,
18103434-18103537,18103623-18103748,18103872-18103982,
18104200-18104304
Length = 881
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 398 DVQQNERRRQIDSVRL*NMSALSRAVSLGG*FEKLMTMFPF 276
DVQQN+ R+ ++ +RL + + ++S+ G F L+ + F
Sbjct: 267 DVQQNKTRKLLEEIRLSGYNIIGLSLSIQGAFSDLLDISSF 307
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 205 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 263
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 264 SYQNSKGNTSIRFINYKPRTT 284
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 919 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 977
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 978 SYQNSKGNTSIRFINYKPRTT 998
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 205 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 263
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 264 SYQNSKGNTSIRFINYKPRTT 284
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 203 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 261
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 262 SYQNSKGNTSIRFINYKPRTT 282
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 208 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 266
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 267 SYQNSKGNTSIRFINYKPRTT 287
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 208 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 266
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 267 SYQNSKGNTSIRFINYKPRTT 287
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 208 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENYI 266
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 267 SYQNSKGNTSIRFINYKPRTT 287
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 208 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENFI 266
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 267 SYQNSKGNTSIRFINYKPRTT 287
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 203 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENFI 261
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 262 SYQNSKGNTSIRFINYKPRTT 282
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 203 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENFI 261
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 262 SYQNSKGNTSIRFINYKPRTT 282
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 140 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENFI 198
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 199 SYQNSKGNTSIRFINYKPRTT 219
>08_02_0001 + 11166161-11166488,11166504-11167390
Length = 404
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 200 NRSASKYKINVNDVIENMHS-KGITFMSPLKISSEERAGEEWKISDLIESKTLSQPENFI 258
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 259 SYQNSKGNTSIRFINYKPRTT 279
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV N + K I + + + + + +S + K N
Sbjct: 156 NRSASKYKINVNDVIENMHS-KGITFKSPLKISSEERAGEEWKISDLIESKTLSQPENYI 214
Query: 262 LLMSLNGNIVINFSNYPPSET 324
+ GN I F NY P T
Sbjct: 215 SYQNSKGNTSIRFINYKPRTT 235
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV + K I + + + + ++ +S+F+ K N
Sbjct: 141 NRSASKYKINVNDVIEKMHS-KGIKFMSPLIIDSEERAGEKWPISEFIKNKTLSQPENFI 199
Query: 262 LLMSLNGNIVINFSNY 309
GN+ I F+NY
Sbjct: 200 SYQDSKGNVSIRFTNY 215
>10_08_0897 - 21419639-21420633,21420826-21421153
Length = 440
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 91 NRLRTRFKINIVDVFVNYYRLKCILYFNTI*FGARXI---RYSVSKFVILKHFDYNXNKF 261
NR +++KIN+ DV + K I + + + + ++ +S+F+ K N
Sbjct: 141 NRSASKYKINVNDVIEKMHS-KGIKFMSPLIIDSEERAGEKWPISEFIKNKTLSQPENFI 199
Query: 262 LLMSLNGNIVINFSNY 309
GN+ I F+NY
Sbjct: 200 SYQDSKGNVSIRFTNY 215
>10_01_0164 + 1863890-1866253
Length = 787
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 256 KFLLMSLNGNIVINFSNYPPSETARDSADIFHRRTESICLRRSF 387
KFL +S G + + + +DS+ +FH R+ ICL SF
Sbjct: 690 KFLAISSLGQVTFQSVKF----SFQDSSSLFHMRSARICLSCSF 729
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,116,788
Number of Sequences: 37544
Number of extensions: 229235
Number of successful extensions: 506
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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