Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_E08
         (399 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    31   0.087
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    28   0.61 
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po...    27   1.1  
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl...    26   2.5  
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni...    25   5.7  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    24   7.6  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    24   7.6  
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|...    24   10.0 
SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr 1...    24   10.0 

>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 30.7 bits (66), Expect = 0.087
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -1

Query: 282 TLKFSSR-TETATNLLTTAR-TSLILPKTTTLMETATNL--STTVHITWTVP 139
           T  FSS  TET+T+ +T+   TS++ P +T+   T T +  +T+++ T TVP
Sbjct: 46  TTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVP 97


>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 27.9 bits (59), Expect = 0.61
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -3

Query: 265 SNRNGYEPIDNRPYIVNPPKD-YNPNG-NGYEPIDNGAYYVDRPQG---RPYF 122
           +NR  Y+  +++ Y   P +D YN N  N Y PI N  Y+++   G    PYF
Sbjct: 100 NNRTYYK--NSQGYRRKPKRDDYNNNRKNFYPPIQNSTYFINATGGIDSMPYF 150


>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 658

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 258 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
           ET T  +    T   + +TTT+      + T +  T T P  + T+ LP+
Sbjct: 105 ETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPM 154



 Score = 23.8 bits (49), Expect = 10.0
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -1

Query: 258 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
           ET T L   A T+ +   TTT     T    TV  T T P  +  + LP+
Sbjct: 147 ETTTILPMAAMTTPMEETTTTTPMVETTTIPTVE-TMTTPMVEAMTILPM 195


>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
           Plh1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 623

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 208 KDYNPNGNGYEPIDNGAYYVDRPQGRP 128
           K Y  +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504


>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
            Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2199

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 197  VVVFGRINDVRAVVNRFVAVSVRDENL 277
            V++  R+  +R +VNR   V  +DE L
Sbjct: 1315 VIIRNRLTSIRFIVNRKFFVCFKDETL 1341


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 241 IDNRPYIVNPPKDYNPNGNGYEPIDNGAY 155
           +++ PY+ N   D+N NGN   P+   +Y
Sbjct: 370 VNSMPYLSNG--DHNNNGNTSSPVSRFSY 396


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -1

Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
           T   +S T  ++   TTA ++   P T+    TAT+ S+T   +     A   SS PL
Sbjct: 334 TATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPL 391



 Score = 24.2 bits (50), Expect = 7.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -1

Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
           T   +S T  ++   TTA ++   P T+    TAT+ S+T   +     A   SS PL
Sbjct: 448 TATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPL 505



 Score = 23.8 bits (49), Expect = 10.0
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = -1

Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
           PT   SS   ++ N  TTA ++   P ++    TAT+ S+T   +     A   SS PL
Sbjct: 416 PTSSVSSTPLSSANS-TTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPL 473


>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 483

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 285 PTLKFSSR-TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
           P L    + TE +   LTT  T+LIL    T   T   +  ++H    VPK    SS
Sbjct: 118 PDLSLDEKITEFSRLKLTTGNTALILSGGGTFGMTHIGVLQSLHEQGLVPKIICGSS 174


>SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 486

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 265 SNRNGYEPIDNRPYIVNPPKDYNPNGNGY 179
           S  NGY+P+     I   P  Y P  +G+
Sbjct: 417 STNNGYQPLRKNQVITIEPGLYVPEEDGW 445


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,622,992
Number of Sequences: 5004
Number of extensions: 33809
Number of successful extensions: 97
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)