Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E08
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6) 32 0.15
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 0.35
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 31 0.35
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 31 0.46
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.60
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 30 0.60
SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 1.4
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22) 29 1.4
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 29 1.4
SB_7457| Best HMM Match : DUF161 (HMM E-Value=7.4) 29 1.4
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 29 1.8
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 28 2.4
SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 28 3.2
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7) 27 4.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_28069| Best HMM Match : RVT_1 (HMM E-Value=1.8e-28) 27 4.3
SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32) 27 4.3
SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 27 4.3
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 27 5.6
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 27 5.6
SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 5.6
SB_37050| Best HMM Match : Gag_MA (HMM E-Value=3.7) 27 7.4
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6) 27 7.4
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006) 26 9.8
SB_48412| Best HMM Match : ResIII (HMM E-Value=0.19) 26 9.8
SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 26 9.8
SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
>SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)
Length = 127
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 288 WPTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLST 166
W T S+ T T T TT T+ KTTT T T ++T
Sbjct: 53 WTTTTTSTITTTTTTTTTTKTTTTTTTKTTTTTATTTEITT 93
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.5 bits (68), Expect = 0.26
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T+ + T TA N TT T+ TTT T +TT + T T P TS
Sbjct: 99 TITTYTATVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTS 152
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 252 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
AT +TT ++ P TT TAT +TT T T P A T+
Sbjct: 96 ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 261 TETATNLLTTA-RTSLILPKTTTLMETATNLSTTVHITWTVP 139
T T+ N TT T+ P TTT TAT +TT T T P
Sbjct: 149 TTTSPNATTTTPNTTTTTPNTTTTTPTAT--TTTPTATTTTP 188
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 31.1 bits (67), Expect = 0.35
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 31.1 bits (67), Expect = 0.35
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
P +S T A T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 761 PETTAASETTVAPET-TDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814
Score = 31.1 bits (67), Expect = 0.35
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T A + + PKTTT +ET TTV + T P + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV-PKADLTSSLPL 109
PT+ S+ TA +T A + ++P+TT +ET + +T TV P+ ++ L
Sbjct: 1751 PTI--STAKTTAEPEITVAPETTVVPETTPALETTSAPESTAATESTVAPETTVSQETTL 1808
Query: 108 XP 103
P
Sbjct: 1809 AP 1810
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 112
T A + +P+TTT +ET T L TV A T+ P
Sbjct: 2663 TDAPVTTFVPETTTALETTTALEITVEPETKTTAAPETTVAP 2704
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV-PKADLTSSLPL 109
P + +T TA A+T+++ P+TT +ET + +T TV P+ + +
Sbjct: 779 PATTLAPKTTTALETTVAAKTTVV-PETTPALETTSAPESTAATESTVAPETTVPTETAA 837
Query: 108 XP 103
P
Sbjct: 838 AP 839
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 30.7 bits (66), Expect = 0.46
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 282 TLKFSSRTETATN-LLTTARTSLILPKTTTLMETATNLSTTVHITWTV 142
T S+ T T T +++T T+ TTT+ T T +TT+ IT T+
Sbjct: 119 TTTISTTTTTITAVIISTTTTTTSTANTTTITATITTTTTTITITATI 166
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 142
S+ T T + TT T+ I TTT+ TAT + T IT T+
Sbjct: 135 STTTTTTSTANTTTITATITTTTTTITITATITTITTTITATI 177
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
T ++ T +T + TT T+ I TTT+ TA +STT T T +T+++
Sbjct: 100 TTTTTTTTTISTTISTTTTTTTISTTTTTI--TAVIISTTTTTTSTANTTTITATI 153
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T ++ T T T +TT T++ + T T + T + T I+ T P T S
Sbjct: 139 TTTSTANTTTITATITTTTTTITITATITTITTTITATITTTISTTTPFITATIS 193
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T T T T T+ I TTT +T +STT T
Sbjct: 84 TTTTTTFSATTTTTTITTTTTTTTTISTTISTTTTTT 120
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 145
T+ ++ T T T +TT T++ TTT+ T ++ T+ T T
Sbjct: 152 TITTTTTTITITATITTITTTITATITTTISTTTPFITATISTTIT 197
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLME-TATNLSTTVHITWTVPKADLTSSLPLXPGA 97
T +L+TTA + P+TTT E T +TT + T P+ S + P A
Sbjct: 139 TTASLVTTAPEATTAPETTTAPEATTAPETTTASLVTTAPETTTASLVTTAPEA 192
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLXPGA 97
T +L TTA + P+TTT + T +TT + T P+A S P A
Sbjct: 524 TTASLATTAPETTTAPETTTASLATTAPETTTASLVTTAPEATTASLATTAPEA 577
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 237 TTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLXP 103
TTA + PKTTT + T +TT + T P+A S L P
Sbjct: 638 TTASLATTAPKTTTASLATTAPEATTASLVTTAPEATTASLLTTAP 683
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTT--LMETA-----TNLSTTVHITWTVPKADLTSSLPLXPGA 97
T + LTTA + P+TTT L+ TA +L+TT + T P+A S + P A
Sbjct: 91 TTASFLTTAPEATTAPETTTASLVTTAPEATTASLATTALLVTTAPEATTASLVTTAPEA 150
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLXPGA 97
T +L TTA + P+TTT + T +TT + T P+ S P A
Sbjct: 193 TTASLATTASLATTAPETTTASLATTAPEATTASLATTAPETTTASLATTAPEA 246
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLXPGA 97
T +L TTA + P+T T + T +TT + T PK S P A
Sbjct: 608 TTASLATTASLATTAPETATASLATTAPEATTASLATTAPKTTTASLATTAPEA 661
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTS 121
T +L TTA + P+TTT + T +TT + T P+A S
Sbjct: 566 TTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEATTAS 611
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLX 106
T ++ + TTA + P+TTT + T +TT + T P+ S L
Sbjct: 40 TYNYTIKISEKRKKTTTASLATTAPETTTASLVTTAPETTTASLATTAPETTTASFLTTA 99
Query: 105 PGA 97
P A
Sbjct: 100 PEA 102
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 145
T T T TT T+ I TTT T TN +TTV+ T T
Sbjct: 543 TITITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHI 154
T T + T+ I TTT+ T TN +TT+ I
Sbjct: 384 TITTITNYTTTTTITNYTTTVSTTITNYTTTITI 417
>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
T T ++T + T I+ TTT+ T T ++TT+ T T +T+++
Sbjct: 15 TNATTTIITLSTT--IITTTTTITTTTTTITTTITPTITTTTTIITTTI 61
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 279 LKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
+ S+ T T +TT T++ T T+ T T ++TT+ T
Sbjct: 22 ITLSTTIITTTTTITTTTTTITTTITPTITTTTTIITTTITTT 64
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTVPKADLTSSLPL 109
T T ++TT T+ I+ T T T T ++TTV IT T+ +T++ P+
Sbjct: 1082 TTITTTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITTTDPI 1135
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTVPKADLTSSL 115
T T ++TT T+ I+ T T T ++TT+ IT TV +T+++
Sbjct: 1073 TTINTTIITTTITTTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTI 1124
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETA-TNLSTTVHITWTVPKADLTSS 118
T+TAT+ T TS +L +T L+ T T+ +T+ H+T LTS+
Sbjct: 436 TDTATS--TAVVTSTVLVASTRLLSTVKTHTATSTHVTTATSTDTLTST 482
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -1
Query: 267 SRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S+T AT L+T+ T +T+ + T LST+ T P T +
Sbjct: 453 SQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKA 502
>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
Length = 266
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -1
Query: 249 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 142
TN++TT+ T++I T T+ T T ++ T+ IT T+
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI 202
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 145
PT+ ++ T T ++TT + I+ T T++ T T + + T T
Sbjct: 493 PTISINTTTTVTTTIITTTIITTIIITTATIITTTTIIINVIIATTT 539
>SB_7457| Best HMM Match : DUF161 (HMM E-Value=7.4)
Length = 142
Score = 29.1 bits (62), Expect = 1.4
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 77 ILYFPPRAPGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVAV 256
+L+ PRA RG ++V A+ V+ V VAV++ V V + V V VAV
Sbjct: 11 VLFILPRADPVRGGVDVAVAVAGAAVVAVAVAVAVAVAVAVAVVVAV-AVAVAVAVAVAV 69
Query: 257 SV 262
+V
Sbjct: 70 AV 71
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 297 CWLWPTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLST-TVHITWTVPKADL 127
C T ++ T TAT TTA T+ TTT T TN +T T I W D+
Sbjct: 520 CSCTATTATATTTATATTTATTAATA-----TTTTTTTTTNTTTNTTIIIWIAAVTDV 572
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T ++ T T T TTA + TTT T T +TT T T T+
Sbjct: 10 TTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 130
T ++ TAT TA T+ TTT T T +TT T T D
Sbjct: 17 TTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKNND 67
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T T T TT T+ TTT TAT + T+ IT
Sbjct: 46 TTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITIT 82
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T+K + T + TT T+ TTT T T +TT T T +T+
Sbjct: 30 TIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITITT 83
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T T T TT T+ TTT TAT + T+ IT
Sbjct: 168 TTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITIT 204
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T+K + T + TT T+ TTT T T +TT T T +T+
Sbjct: 152 TIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITITT 205
>SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
++ T T T +TT T++ + T T + T + T I+ T P T S
Sbjct: 2 TANTTTITATITTTTTTITITATITTITTTITATITTTISTTTPFITATIS 52
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 145
T+ ++ T T T +TT T++ TTT+ T ++ T+ T T
Sbjct: 11 TITTTTTTITITATITTITTTITATITTTISTTTPFITATISTTIT 56
>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +2
Query: 116 RLEVRSALGTVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVAVSVR 265
R+ +R + +V V V+ R+VA S+RVV+ + VR V+ R+VA SVR
Sbjct: 819 RVVMRRYVASVRV---VMRRYVA-SVRVVMRRYVTSVRVVMRRYVA-SVR 863
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 164 VVDRFVAV-SIRVVVFGRINDVRAVVNRFVAVSVR 265
V+ R+VA+ S+RVV+ + VR V+ R+VA SVR
Sbjct: 808 VMRRYVAIASVRVVMRRYVASVRVVMRRYVA-SVR 841
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 164 VVDRFVAVSIRVVVFGRINDVRAVVNRFVAVSVR 265
V+ R+VA S+RVV+ + VR V+ R+VA SVR
Sbjct: 764 VMRRYVA-SVRVVMRRYVTSVRVVMRRYVA-SVR 795
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 164 VVDRFVAVSIRVVVFGRINDVRAVVNRFVAV-SVR 265
V+ R+VA S+RVV+ + VR V+ R+VA+ SVR
Sbjct: 786 VMRRYVA-SVRVVMPRYVASVRVVMRRYVAIASVR 819
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T + T T T+ L TTL+ T +L+T + T P+A +T +
Sbjct: 728 TPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTLIATTPEASITQT 775
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
T +S T+T+T+ T+ L TTL+ T +L+T + T P ++L
Sbjct: 682 TPPIASTTDTSTSQTPPIATTPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTL 737
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVH-ITWTVPKADLTSSLPLXP 103
T A + +P+TTT +ET T L TV T P+ L P
Sbjct: 1148 TDAPVTTFVPETTTALETTTALEITVEPETSVAPETSLAPETTAAP 1193
Score = 26.2 bits (55), Expect = 9.8
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTT-VHITWTVPKADLTSSLPL 109
P S T A T A + + P+TT ET TT V T VP+ +T +
Sbjct: 2823 PETTLSPETTVAPET-TVALGTTVTPETTVAPETTEEPETTVVPETTAVPETTITQETTV 2881
Query: 108 XP 103
P
Sbjct: 2882 AP 2883
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLME-TATNLSTTVHITWTVPKADLTSSLPLXP 103
TA T + + + P+TT L E T +++T + T VP+ + L P
Sbjct: 2868 TAVPETTITQETTVAPETTALPESTVASMTTVLPGTTVVPETTVVPGTTLAP 2919
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTT-VHITWTVPKADLTSSLPLXP 103
T A + + P+TT ET TT V T VP+ +T + P
Sbjct: 3178 TVASETTVTPETTVAPETTEEPETTVVPETTAVPETTITQETTVAP 3223
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = -3
Query: 250 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY--YVDRPQGRPYFKPTPXP 104
Y P N PY P Y P N Y P N Y + P P + P P P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 261 TETATNLL---TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T ATN TTA T+ P TTT T T L+TT T T T+
Sbjct: 4 TAPATNTAPATTTAPTTATAPTTTTAPTTNTALTTTTAPTTTTAPTTTTA 53
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
PT + T TA TTA T+ P TTT T T +TT T P D +S
Sbjct: 24 PTTTTAPTTNTALTT-TTAPTTTTAPTTTTAPTTTTAPTTT-----TTPNNDYNTS 73
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 170 RQRCILRGPSPRPTLLQAYPFXLVLAVGSKEYL 72
R C+ R PSP P+L P LV A +K YL
Sbjct: 4115 RSGCLAREPSPAPSL----PCDLVAATSAKMYL 4143
>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
Length = 122
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T T ++TT T++I+ T T++ T + TT+ T T+ +T+
Sbjct: 42 TTIITTMITTIITTVIIIITITIITIITTIITTIITTITIITTIITT 88
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 142
T+ ++ T T ++TT T++ + TT + T + TTV I T+
Sbjct: 16 TVIITTMITTITVIITTMITTITITTTTIITTMITTIITTVIIIITI 62
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 258 ETATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 112
ET TTA + LPKTT + ET TT T + DLT LP
Sbjct: 229 ETIAKPETTAPPETTALPKTTAVPETTAAPETTAKPETTDLRVDLTIFLP 278
>SB_28069| Best HMM Match : RVT_1 (HMM E-Value=1.8e-28)
Length = 593
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 154 YVDRPQGRP-YFKPTPXPWCSRWEVKNILE 68
YVD PQ +P YFKP P + R +V+ L+
Sbjct: 379 YVD-PQAKPKYFKPRPLEYARRQKVERELD 407
>SB_27987| Best HMM Match : RVT_1 (HMM E-Value=4.8e-32)
Length = 779
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 154 YVDRPQGRP-YFKPTPXPWCSRWEVKNILE 68
YVD PQ +P YFKP P + R +V+ L+
Sbjct: 436 YVD-PQAKPKYFKPRPLEYARRQKVERELD 464
>SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -3
Query: 229 PYIVNPPKDY--NPNGNGYEPIDNGAYYVDRPQG 134
P+ ++P Y +PNG Y NG YV P G
Sbjct: 8 PFSISPGVQYVFHPNGVQYVTQPNGVQYVTHPNG 41
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 226 YIVNPPKDY--NPNGNGYEPIDNGAYYVDRPQGRPY 125
Y+ +P Y +PNG Y NG +V P G Y
Sbjct: 116 YVTHPNAQYVAHPNGAQYVTHPNGVQFVTHPNGVQY 151
>SB_23220| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 1597
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 154 YVDRPQGRP-YFKPTPXPWCSRWEVKNILE 68
YVD PQ +P YFKP P + R +V+ L+
Sbjct: 592 YVD-PQAKPKYFKPRPLEYARRQKVERELD 620
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 255 TATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
T +L+T T L++ T L+ T + V IT T+P +T+ LPL
Sbjct: 278 TILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPL 327
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETA--TNLSTTVHITWTVPKADLTSSLPL 109
T T T L T L L TTL+ T + V IT T+P +T++LPL
Sbjct: 539 TITTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPL 591
>SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = -3
Query: 229 PYIVNPPK-----DYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPWCSRWEV 83
P +VN K ++N N N Y+PI D FK P P ++EV
Sbjct: 875 PVVVNDDKYRSFSNHNMNANNYKPIGRNFLLEDNRNFSKSFKNDPLPSPPQYEV 928
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 142
T TN++TTA T+ +T+ T T +T + I T+
Sbjct: 297 TNTNIITTATTTTTSTTISTITVTITTTTTIIIIVITI 334
>SB_37050| Best HMM Match : Gag_MA (HMM E-Value=3.7)
Length = 419
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 238 DNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
D+ ++ PP + GYE +D A VDR P P P P
Sbjct: 62 DHLKKMITPPAG-GASEVGYEVVDGSAPEVDRDCATPPDTPQPSP 105
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 130
TATN TA +PKTTT ET TTV T D
Sbjct: 357 TATN---TAPDKTAVPKTTTAPETTDASKTTVETQQTTYSRD 395
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -3
Query: 313 IFVLALLAMANAQVLISNRNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQG 134
I ++ LL ANA V N++G+ P+D + P GA ++ P+G
Sbjct: 127 IDIVRLLLRANANVRALNQHGHMPMDLADDEASGRNSEGPESARISEDPEGARNIEDPEG 186
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 226 YIVNPPKDYNPNGNGYEPID-NGAYYVDRPQGRPYFKPTPXP 104
Y PP DY N N Y P NG Y RP Y P P
Sbjct: 260 YYRRPPHDYQFNRN-YPPNQYNGNYQGGRPPPHGYGDPNGRP 300
>SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6)
Length = 541
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 279 LKFSSRTE-TATNLLTTARTSLILPKTTTLMETATNLS 169
L FS R E + LLT R S++LP T E A LS
Sbjct: 354 LTFSHRYEGVCSYLLTPLRGSVLLPSHTATRECALTLS 391
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
++ T TAT TT + TTT T T + T T +A T+
Sbjct: 315 ATTTATATTTATTTEAAATAEATTTATATTTTAAITTTAATTTSEAAATA 364
>SB_34463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 26.2 bits (55), Expect = 9.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 276 KFSSRTETATNLLTTARTSLILPKTTTLMETATNLST-TVHITWTVPKADLTSS 118
+ +T T T TTA T TTT + T T L+T T T T P D +S
Sbjct: 16 RLQHQTTTTTPATTTALT------TTTALTTTTALATNTAPTTTTTPNNDYNTS 63
>SB_54977| Best HMM Match : MFS_1 (HMM E-Value=0.006)
Length = 698
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 235 NRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPW 101
+RP + NP DY G EP + +D+ + PYF P PW
Sbjct: 521 HRPVMDNP--DYELTG---EPEIDKMVDMDKSRYLPYFYKGPSPW 560
>SB_48412| Best HMM Match : ResIII (HMM E-Value=0.19)
Length = 1390
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 170 RQRCILRGPSPRPTLLQAYPFXLVLAVGSKEYL 72
R C+ RGPS P+L P LV A ++ YL
Sbjct: 904 RSGCLARGPSTAPSL----PCDLVAAASARMYL 932
>SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = -3
Query: 256 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 113
+GY+ DN Y + NGY DN P P +K T
Sbjct: 387 DGYQTYDNPTYDTEHETHAEAHVNGYPTYDNPTCDTHSPARAPAYKRT 434
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTT 163
TAT T A + + P+TT + ET L TT
Sbjct: 1695 TATAKTTAAPETTVAPETTVVPETTPALETT 1725
>SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 170 RQRCILRGPSPRPTLLQAYPFXLVLAVGSKEYL 72
R C+ RGPS P+L P LV A ++ YL
Sbjct: 730 RSGCLARGPSTAPSL----PCDLVAATSARMYL 758
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,076,045
Number of Sequences: 59808
Number of extensions: 261286
Number of successful extensions: 1240
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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