Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E08
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 32 0.81
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 2.5
U48436-1|AAC82513.1| 1311|Homo sapiens fragile X mental retardat... 30 3.3
L76569-1|AAA99416.1| 1276|Homo sapiens fragile X E mental retard... 30 3.3
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 30 3.3
BC132683-1|AAI32684.1| 1301|Homo sapiens AFF2 protein protein. 30 3.3
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 30 3.3
AJ001550-1|CAA04822.1| 1272|Homo sapiens FMR2 protein protein. 30 3.3
AF012624-1|AAB71534.1| 1311|Homo sapiens familial mental retarda... 30 3.3
AB102644-1|BAC81113.1| 1272|Homo sapiens FMR2 protein. 30 3.3
U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protei... 29 4.3
BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1... 29 4.3
AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein. 29 4.3
BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein pr... 29 5.7
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 29 5.7
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 29 7.5
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 29 7.5
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 29 7.5
AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein pr... 29 7.5
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 29 7.5
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 29 7.5
AK023308-1|BAB14518.1| 618|Homo sapiens protein ( Homo sapiens ... 28 9.9
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.9 bits (69), Expect = 0.81
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXP 103
T +TT RTS +P TTT+ T + ++ T TVP S+ P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 30.7 bits (66), Expect = 1.9
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -1
Query: 282 TLKFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
T++ S+ T T + TT T++ +P TTT+ T T +STT + T T+S+P+
Sbjct: 143 TVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPV 199
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 124
+S T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 419 TSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
>U48436-1|AAC82513.1| 1311|Homo sapiens fragile X mental retardation
protein FMR2p protein.
Length = 1311
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 978 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 1030
>L76569-1|AAA99416.1| 1276|Homo sapiens fragile X E mental retardation
syndrome protein protein.
Length = 1276
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 943 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 995
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
>BC132683-1|AAI32684.1| 1301|Homo sapiens AFF2 protein protein.
Length = 1301
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 968 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 1020
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 237 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 109
TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
>AJ001550-1|CAA04822.1| 1272|Homo sapiens FMR2 protein protein.
Length = 1272
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 939 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 991
>AF012624-1|AAB71534.1| 1311|Homo sapiens familial mental retardation
protein 2 protein.
Length = 1311
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 978 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 1030
>AB102644-1|BAC81113.1| 1272|Homo sapiens FMR2 protein.
Length = 1272
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 276 KFSSRTETATNL-LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
K SS T T TN + TA + TTT+ TAT +TT T T+ + +TS++
Sbjct: 939 KASSATITVTNTAIATATVTATAIVTTTVTATATATATTTTTTTTI--STITSTI 991
>U91329-1|AAC52117.1| 1103|Homo sapiens kinesin-like motor protein
KIF1C protein.
Length = 1103
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 308 RPRSAGYGQRSSSHLEPKRLRTY*QPP 228
R R AG Q H +PK+ +Y QPP
Sbjct: 1039 RSRGAGSAQPEPQHFQPKKHNSYPQPP 1065
>BC034993-1|AAH34993.1| 1103|Homo sapiens kinesin family member 1C
protein.
Length = 1103
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 308 RPRSAGYGQRSSSHLEPKRLRTY*QPP 228
R R AG Q H +PK+ +Y QPP
Sbjct: 1039 RSRGAGSAQPEPQHFQPKKHNSYPQPP 1065
>AB014606-1|BAA31681.2| 1123|Homo sapiens KIAA0706 protein protein.
Length = 1123
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 308 RPRSAGYGQRSSSHLEPKRLRTY*QPP 228
R R AG Q H +PK+ +Y QPP
Sbjct: 1059 RSRGAGSAQPEPQHFQPKKHNSYPQPP 1085
>BX537728-1|CAD97821.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 307 VLALLAMANAQVLISNRNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDN 164
V +L +M + IS G PID + + PP P GNG D+
Sbjct: 128 VSSLRSMQSQAFRISQNTGPPPIDRQKRLSYPPVQSIPTGNGIPSRDS 175
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 307 VLALLAMANAQVLISNRNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDN 164
V +L +M + IS G PID + + PP P GNG D+
Sbjct: 1204 VSSLRSMQSQAFRISQNTGPPPIDRQKRLSYPPVQSIPTGNGIPSRDS 1251
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein
protein.
Length = 266
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 31 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 62
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 365
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 199 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXP 104
N NGNGY G V P G P +PT P
Sbjct: 266 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDP 297
>AK023308-1|BAB14518.1| 618|Homo sapiens protein ( Homo sapiens
cDNA FLJ13246 fis, clone OVARC1000682, highly similar to
PROCESSING ALPHA-1,2-MANNOSIDASE (EC 3.2.1.-). ).
Length = 618
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 301 ALLAMANAQVLISNRNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDN 164
+L +M + IS G PID + + PP P GNG D+
Sbjct: 299 SLRSMQSQAFRISQNTGPPPIDRQKRLSYPPVQSIPTGNGIPSRDS 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,072,171
Number of Sequences: 237096
Number of extensions: 1257604
Number of successful extensions: 6810
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6804
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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