Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E08
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 37 0.005
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 34 0.033
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 33 0.057
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.23
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.23
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.23
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 0.53
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 30 0.53
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 30 0.53
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 29 0.93
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 29 0.93
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 0.93
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 0.93
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 29 0.93
AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical ... 29 1.2
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 1.2
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 29 1.2
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 28 2.1
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 28 2.1
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 2.1
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 28 2.1
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 2.8
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 2.8
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 2.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 2.8
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 28 2.8
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 28 2.8
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 27 3.7
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 3.7
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 27 3.7
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 27 3.7
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 5.0
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 27 5.0
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 27 5.0
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 27 5.0
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 27 5.0
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF024500-1|AAB70364.1| 339|Caenorhabditis elegans Hypothetical ... 27 6.5
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 26 8.7
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 26 8.7
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 37.1 bits (82), Expect = 0.005
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Frame = -1
Query: 300 LCWLWPTLKFSSRTETATNLLT----TARTSLILPKTTTLMETATNLSTTVHI---TWTV 142
LC+LW L ++ T T T T T T++++ TTT +TTV + T TV
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 141 PKADLTSSLPL 109
P + T++ PL
Sbjct: 239 PTNETTTTSPL 249
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 35.1 bits (77), Expect = 0.019
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 112
++ T+T T TT T P TTT T T + T T T K T+S P
Sbjct: 260 TTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTP 312
Score = 33.9 bits (74), Expect = 0.043
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
TET T TT T+ TTT ET T +TT T T P T+
Sbjct: 114 TETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 31.1 bits (67), Expect = 0.30
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILP----KTTTLMETATNLSTTVHITWTVPKADLTSS 118
PT ++ T T T TT+ T+ P +TTT T T TT T T P T++
Sbjct: 234 PTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTA 293
Score = 30.7 bits (66), Expect = 0.40
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLT 124
++ T T T TT T+ +P TTT T T +TT T T P T
Sbjct: 197 TTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTT 246
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
++ T T T TT T+ P TTT T TT T T P T+
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Score = 29.9 bits (64), Expect = 0.70
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 118
T ++ + T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 64 TTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXP 103
++ T T T T T+ P TTT T +TT T T P + + P
Sbjct: 204 TTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTP 259
Score = 29.5 bits (63), Expect = 0.93
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T ++ TET T TT + P TTT T T +TT T T P T+
Sbjct: 130 TTPTTTTTETTTTPTTTTTETTTTPTTTTT--TPTTTTTTPTTTTTTPTTTTTT 181
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
PT ++ T T T + P TTT T T +TT T T P T +
Sbjct: 95 PTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTET 150
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKADLTS 121
++ T T TT T+ P TTT + T T TT T T P T+
Sbjct: 190 TTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T T TT T+ TTT T T +TT T T P T+
Sbjct: 121 TTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTT 167
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.033
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTVPKADLTSSLP 112
PT + T T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 294 PTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 31.1 bits (67), Expect = 0.30
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKADLTSS 118
PT ++ T T T TT T+ P TTT T T STT T T T++
Sbjct: 269 PTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTA 325
Score = 29.9 bits (64), Expect = 0.70
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 124
PT ++ T T T TT +T+ I TTT T T +TT T T P T
Sbjct: 312 PTTTTTAPTTTTTASTTTFKTTTIT--TTTQTTTPTTTATTTKPTTTTPTTTRT 363
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 267 SRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S T T T T T+ TTT T T +TT T T P T S
Sbjct: 252 STTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTES 301
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 33.5 bits (73), Expect = 0.057
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVH--ITWTVPKADLTSS 118
TET T TT +P TTT T T +TT T T P A T+S
Sbjct: 141 TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTS 190
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
++ TET T +T T+ + P TTT T T ++TT T P
Sbjct: 200 TTTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTTSTSPAP 243
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLX 106
P + + R + T T+ ++ TTT + TN +TT+ +T T T+S PL
Sbjct: 17 PVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTI-LTTTTTVTTTTTSPPLI 75
Query: 105 P 103
P
Sbjct: 76 P 76
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.5 bits (68), Expect = 0.23
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
T T T TT+ T+ P TTT T STT T T P
Sbjct: 62 TTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXP 103
T ++ T T TT T+ TTT T STT T T A T++ P
Sbjct: 70 TTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.5 bits (68), Expect = 0.23
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLT-TARTSLILPKTTTLMETATNLSTTVHITWTVP 139
PT S+ T T T T T T+ P TTT E L+T TWT P
Sbjct: 621 PTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 264 RTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
+ T +T+ T+ P TTT + + T STT T T PK ++S
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT-TTTTTPKPTTSTS 626
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.5 bits (68), Expect = 0.23
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLT-TARTSLILPKTTTLMETATNLSTTVHITWTVP 139
PT S+ T T T T T T+ P TTT E L+T TWT P
Sbjct: 621 PTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 264 RTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
+ T +T+ T+ P TTT + + T STT T T PK ++S
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT-TTTTTPKPTTSTS 626
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 112
PT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 496 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 112
PT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 337 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 112
PT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 377 PTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 258 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 303 ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTV 160
T ++ T +T +TT T P TTT TA +TT+
Sbjct: 310 TTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 258 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 303 ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTV 160
T ++ T +T +TT T P TTT TA +TT+
Sbjct: 310 TTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 29.5 bits (63), Expect = 0.93
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 267 SRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S T T T +T T+L TTT T T + +I T+P T S
Sbjct: 212 STTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQS 261
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T+ S T T TT S TTT+ TNL+TT T
Sbjct: 192 TISNSLSTTTVVKSTTTLPISTTTTTTTTITPKHTNLTTTATTT 235
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 29.5 bits (63), Expect = 0.93
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 267 SRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S T T T +T T+L TTT T T + +I T+P T S
Sbjct: 212 STTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQS 261
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T+ S T T TT S TTT+ TNL+TT T
Sbjct: 192 TISNSLSTTTVVKSTTTLPISTTTTTTTTITPKHTNLTTTATTT 235
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 0.93
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTSSLP 112
T++ +S T T+T +T+ TS ++T+ + +T LST++ T T SSLP
Sbjct: 319 TIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLP 377
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T + S + T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 403 TTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 0.93
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTSSLP 112
T++ +S T T+T +T+ TS ++T+ + +T LST++ T T SSLP
Sbjct: 319 TIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLP 377
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 121
T + S + T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 403 TTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 29.5 bits (63), Expect = 0.93
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 255 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXPGA 97
T T + TT RTS +P TTT + + T P D T + P A
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKTPATMPSA 346
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 246 NLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLXPGAR 94
N+ TT I TTT M T T ST + T T P+ ++P R
Sbjct: 283 NVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTR 330
>AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical
protein F49F1.7 protein.
Length = 240
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 112
TET TT TT T STTV T T PK T S P
Sbjct: 159 TETTETTETTKAIKTTKTTETTKATKTTTPSTTVKTTTTKPKPPCTDSSP 208
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 29.1 bits (62), Expect = 1.2
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTART-SLILPKTTTLMETATNLSTT-------VHITWTVPKAD 130
PT S+ T+T T + T+ T S TTT T T STT V IT T P D
Sbjct: 278 PTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTTTSDDLLWVKITTTPPPPD 337
Query: 129 LT 124
T
Sbjct: 338 TT 339
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTAR---TSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T + S+ ET T TT T+ +TTT + T+T+ +T T T P T++
Sbjct: 259 TEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTT 316
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 29.1 bits (62), Expect = 1.2
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 127 YFKPTPXPWCSRW 89
+FKP+P P+CS+W
Sbjct: 992 FFKPSPGPYCSQW 1004
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
T T + T ART+ P TTT + + T L TT+ + + D +S+
Sbjct: 384 TAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSST 431
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 98 APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 208
APG G +E +LGT++ + D+F A+ R VF
Sbjct: 2831 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2867
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 98 APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 208
APG G +E +LGT++ + D+F A+ R VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 98 APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 208
APG G +E +LGT++ + D+F A+ R VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHI--TWTVPKADLTSSLPLXP 103
SS T T T TS TTT T+T+ STT + T + PK + + P+ P
Sbjct: 463 SSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTPKI-VVNLTPIYP 519
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVPKADLTSSLP 112
+S T +AT L+ T +S TTT + T T +TT + T T T++LP
Sbjct: 449 TSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTST--STSTTTTLP 502
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 98 APGXRGRLEVRSALGTVHVICTVVDRFVAVSIRVVVF 208
APG G +E +LGT++ + D+F A+ R VF
Sbjct: 2842 APGLAGDIETLESLGTLYNEISEFDQFAAIWERRAVF 2878
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV-PKADLTSSLP 112
TET TT T + P TT T T TT T T P+ T+ P
Sbjct: 281 TETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAP 331
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 247 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 161
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S+ T T + T T+ T+T T T ST+ H T + TSS
Sbjct: 270 STTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 320
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
S+ T T + T T+ T+T T T ST+ H T + TSS
Sbjct: 252 STTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSS 302
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -1
Query: 264 RTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV--PKADLTSSLPLXPGA 97
+TE T TT +T+ TTT T T + T T T P T S+P P A
Sbjct: 123 KTEAPTT--TTKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTTTGSVPSYPDA 178
Score = 26.2 bits (55), Expect = 8.7
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
PT T T T TT T+ TTT T STT T +VP
Sbjct: 127 PTTTTKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTT--TGSVP 173
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 27.9 bits (59), Expect = 2.8
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -1
Query: 297 CWLWPTLKFSSRTETATNLLTTARTS---LILPKTTTLMETATNLSTTVHITWTVPKADL 127
C P L F + +A+ +S LILP TTL +T STT T T P
Sbjct: 31 CEKRPELDFCGGSASASGTPVQVASSVVPLILPPMTTL-PPSTTTSTTAEPTTTTPLKSS 89
Query: 126 TSSLPLXPGARG 91
T S+ + G
Sbjct: 90 TDSVDFDEESEG 101
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLME---TATNLS-TTVHI-TWT 145
TL+ +S + T + T+ +P TTT+ E T+T S TT I TWT
Sbjct: 117 TLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWT 167
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3
Query: 250 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 110
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 282 TLKFSSRTETATNLLTTARTSLILPKTTTLME---TATNLS-TTVHI-TWT 145
TL+ +S + T + T+ +P TTT+ E T+T S TT I TWT
Sbjct: 117 TLRTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWT 167
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 288 WPTLKFSSRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 118
+PT+ +T T+ + + I P+ ++ LSTT +T T P + TSS
Sbjct: 412 FPTVGIPGHEQTTTSKMPSTDDDYITPEMSSTASMEITLSTTSDLTSTYP-STFTSS 467
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 27.1 bits (57), Expect = 5.0
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = -3
Query: 298 LLAMANAQVL-ISNRNGYEPIDN----RPYIVNPPKDY--NPNGNGYEPIDNGAYYVDRP 140
LL M VL +S + DN R Y++ + PNGNG+ +D A ++D
Sbjct: 342 LLGMERPDVLELSVHGAHYASDNKKKQRQYLIEVERHILTRPNGNGHSAVDK-AVHLDLS 400
Query: 139 QGRPYF---KPTPXP 104
G P+ K +P P
Sbjct: 401 TGNPHSDAKKSSPSP 415
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 285 PTLKFSSRTETATNLLTTARTS---LILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
PT S+ T T T TT T+ TTT + T +STT T + TS+
Sbjct: 301 PTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDIEKCTSNC 360
Query: 114 PL 109
P+
Sbjct: 361 PV 362
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 151
T T T TS P TTT M+T T +T+ T
Sbjct: 291 TTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTT 327
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -1
Query: 261 TETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADL 127
T +T+ TT+ T+ TTT ET T ++TT+ T + P+A +
Sbjct: 329 TTPSTSTTTTSSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATI 375
Score = 26.2 bits (55), Expect = 8.7
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -1
Query: 267 SRTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 139
S ET + TT +S TTT T T STTV IT T+P
Sbjct: 325 STVETTPSTSTTTTSSTTSTTTTTTTTTETP-STTV-ITTTIP 365
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 27.1 bits (57), Expect = 5.0
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = -3
Query: 298 LLAMANAQVL-ISNRNGYEPIDN----RPYIVNPPKDY--NPNGNGYEPIDNGAYYVDRP 140
LL M VL +S + DN R Y++ + PNGNG+ +D A ++D
Sbjct: 342 LLGMERPDVLELSVHGAHYASDNKKKQRQYLIEVERHILTRPNGNGHSAVDK-AVHLDLS 400
Query: 139 QGRPYF---KPTPXP 104
G P+ K +P P
Sbjct: 401 TGNPHSDAKKSSPSP 415
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 316 MIFVLALLAMANAQVLISNRNGYEPIDNRPYIVNPPKDYNPNGNGY 179
++ VL +L V N N Y+P++ +VNP K + NG+
Sbjct: 808 ILIVLGVLKYVEDHV-DDNANAYKPMNPIEMVVNPTKYAKKSSNGF 852
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = -3
Query: 229 PYIVNPPKDYNPNGNGYEPI----DNGAYYVDRPQGRPYFKPTPXPWCSRWEVKN 77
P V P P G G+ P+ DNGA P G PY P P+ S E K+
Sbjct: 362 PAGVAPAGVVPPPGYGFLPMTDGTDNGAGDTPYPVGPPYPSDVPAPYPSGDEPKD 416
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 270 SSRTETATNLLTTARTSLI-LPKTTTLMETATNLSTTVHITWTVPKADLTSSL 115
++ T+ T TT TS +P TTT E AT T T +PK L L
Sbjct: 116 TTTTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQLAGRL 167
>AF024500-1|AAB70364.1| 339|Caenorhabditis elegans Hypothetical
protein K06H6.5 protein.
Length = 339
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 382 PMSTTLIFSPVITRDHIKMKFFMIFVLALLAMANAQVLISNRN 254
PM+TT +PVI +D + F+ + + N V+ N N
Sbjct: 44 PMNTTTTSAPVIVKDILPGDHITEFIPPFVPLLNDYVITENYN 86
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 220 RCTGGCQ*VRSRFGS 264
RC G CQ ++SR+GS
Sbjct: 1659 RCYGSCQHIKSRYGS 1673
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 258 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 112
E + +L T+ TTT+ T T +TT TVP T+++P
Sbjct: 327 EQSEYILREVPTTTTTTTTTTVPPTTTRTTTTTTPRPTVPTVPRTTTVP 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,023,935
Number of Sequences: 27780
Number of extensions: 198022
Number of successful extensions: 738
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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