Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_E07
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.12 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.65 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 173 YIIYLYTHFYILYKLKETNI 114
           Y IYL+T +YI Y + E +I
Sbjct: 149 YFIYLFTVYYIYYSVHEASI 168


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 202 MYYSILNNNVCDIIGLFYYNLTPTTLHFSIIFSYYYF 312
           ++Y +L   +C  I  FYY     T+H  ++   YYF
Sbjct: 227 LFYCVLIILLC--IYYFYYAFILFTVHLLLLVCIYYF 261



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 247 LFYYNLTPTTLHFSIIFSYYYFTLSKVWC 333
           LFY      T+HF +   Y+Y+    + C
Sbjct: 84  LFYCPFIIFTVHFLLCTYYFYYAFIILLC 112



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 250 FYYNLTPTTLHFSIIFSYYYFTL 318
           FYY     T+H   +   YYF +
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVV 138


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 538 WHAYQPVSYTCTASS 582
           W  YQPVSY     S
Sbjct: 75  WERYQPVSYILNTRS 89


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 538 WHAYQPVSYTCTASS 582
           W  YQPVSY     S
Sbjct: 76  WERYQPVSYILNTRS 90


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 538 WHAYQPVSYTCTASS 582
           W  YQPVSY     S
Sbjct: 76  WERYQPVSYILNTRS 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,064
Number of Sequences: 336
Number of extensions: 2963
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)