Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D19
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   2.4  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   7.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   9.5  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 212 RDGDTYWIIKNSWGPDWGVEGYLLISSRN 126
           + G TY++I  S GP++G    L+ S  N
Sbjct: 251 KGGGTYYMISRSLGPEFGGSIGLIFSLAN 279


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 296 LYTGGIFYDTTCTTKRLNHEMALVGY 219
           L T  IFYDTT T  +  H +    Y
Sbjct: 123 LITDRIFYDTTVTLLQKYHSIIAARY 148


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 564 LRLALRRQWVRGWIRQCSV*LDDEIRFTNRRRIWIL 457
           LR A RRQW+R + R     +    R T+   + +L
Sbjct: 777 LRFANRRQWLRRFYRPVVQRVISSFRTTSHDAVCVL 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,460
Number of Sequences: 2352
Number of extensions: 16095
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)