Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_D14
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerat... 105 5e-23
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z81074-11|CAB03045.2| 562|Caenorhabditis elegans Hypothetical p... 33 0.35
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 3.3
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical pr... 28 10.0
>U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerate
kinase protein 1 protein.
Length = 417
Score = 105 bits (251), Expect = 5e-23
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = -2
Query: 767 RNLLDKVNEMIIGGGMAYTFLKETKGMPIGXSLYDAEGAKIVTKLLEXAEKNNVKVHLPV 588
+NLLDKVNEMIIGGGMAYTFLK +G+ IG SLYD EGAKIV +LLE A+ V++HLPV
Sbjct: 224 KNLLDKVNEMIIGGGMAYTFLKVAQGVKIGNSLYDEEGAKIVNELLEAAKAKGVQIHLPV 283
Query: 587 DFVTADXXDENAS 549
DFV AD E+A+
Sbjct: 284 DFVIADKFAEDAT 296
Score = 80.2 bits (189), Expect = 2e-15
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = -1
Query: 492 LDRNHESSS--QILLPETKVIVWXGPAGVFEXEKFAGGTRAIXDGVVKATSNGTVTIIGG 319
LD ESS + K IVW GPAGVFE +KFA GT+++ D VVKAT+ G +TIIGG
Sbjct: 313 LDVGPESSKIFAAAIQRAKTIVWNGPAGVFEFDKFATGTKSLMDEVVKATAAGAITIIGG 372
Query: 318 GDTATCCAKWGT 283
GDTAT K+ T
Sbjct: 373 GDTATAAKKYNT 384
Score = 63.3 bits (147), Expect = 2e-10
Identities = 46/140 (32%), Positives = 63/140 (45%)
Frame = -3
Query: 868 KKELQYFAXALHEPERPFLAILGGAKVADXILLIETCLIK*MK**LEGVWHTHS*RKPKE 689
K EL YF+ AL P RPFLAILGGAKVAD I LI+ L K + + G + +
Sbjct: 190 KNELSYFSKALDNPARPFLAILGGAKVADKIQLIKNLLDKVNEMIIGGGMAYTFLKVAQG 249
Query: 688 CRLVIPCMTLRELKL*PNYWXKLRKTMLKFTCPXXXXXXXXXMKMHLVGEANVETGIPDG 509
++ K+ + ++ P + E G+PDG
Sbjct: 250 VKIGNSLYDEEGAKIVNELLEAAKAKGVQIHLPVDFVIADKFAEDATSKTVTAEEGVPDG 309
Query: 508 WMGLXVGPKSRELFADPIAR 449
MGL VGP+S ++FA I R
Sbjct: 310 HMGLDVGPESSKIFAAAIQR 329
Score = 61.7 bits (143), Expect = 7e-10
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -2
Query: 281 EDKVSHVSTGGGASLELLEGKVLPGVPALSDA 186
EDKVSHVSTGGGASLELLEGKVLPGV ALS A
Sbjct: 385 EDKVSHVSTGGGASLELLEGKVLPGVDALSPA 416
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 570 ISCNKINGQVNFNIVFLSXFQ*FGHNFSSLSVIQGXTNRHSFGFLQECVCHTPSNYHFIY 749
+S I ++NF +VFL+ FGH+F + +I + F C H Y F Y
Sbjct: 347 LSAENIKKKINFGLVFLNAKIFFGHDFGFIQIITLLDQENFFVLHLFCFYHN-IKYFFYY 405
Query: 750 FI 755
I
Sbjct: 406 II 407
>Z81074-11|CAB03045.2| 562|Caenorhabditis elegans Hypothetical
protein F32B6.10 protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -3
Query: 307 NVLRQVGNQRTRSRTSLL---AVEXLWSYSKEKCFPVFPL---FQMHKSIKHGSSNIYLG 146
N+L + R RSR + + W++SKEK F PL Q S+ SSN +LG
Sbjct: 214 NLLMGAADDRKRSRIVHVIDFGLTRQWAWSKEKAFYARPLRTKVQFRGSLNFTSSNAHLG 273
Query: 145 FK 140
+K
Sbjct: 274 YK 275
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 296 AQHVAVSPPPMIVTVPLDVAFTTPSXMARVPPA 394
+ +V+ P ++V P+ VA T P+ R PPA
Sbjct: 4 SDEASVAEPTVVVATPVAVAVTAPATHPRKPPA 36
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 447 SLAIGSAKSSRDFGPTSSPIHPSGIPVSTLASP 545
S G A S D PT PS IP S+LASP
Sbjct: 802 SFGSGHAPSEFDMAPTKFGSVPSNIPDSSLASP 834
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical
protein C25F6.3 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 351 TSNGTVTIIGGGDTATCCAKWGTR-GQGLARLYWRWSXSGVTRRKSASRCSRSFRC 187
T G V ++G GDTA CA R G + +R +G+ ++ +C
Sbjct: 344 TMRGRVVVLGAGDTAMDCATSALRCGASRVTIAFRKGFTGIRAVPEEMEAAKEEKC 399
>Z47358-9|CAA87434.3| 436|Caenorhabditis elegans Hypothetical
protein ZK1307.7 protein.
Length = 436
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 286 SPLGATRCSITTTNDCDGSIGCSLYD 363
S LG+ RC TT CD G +YD
Sbjct: 359 SGLGSKRCRATTVRYCDTGSGYMVYD 384
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,516,583
Number of Sequences: 27780
Number of extensions: 450467
Number of successful extensions: 1444
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -