Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_D12
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QWA1 Cluster: GLP_177_26570_34507; n=1; Giardia lambl... 36 0.63
UniRef50_Q0ZAG3 Cluster: SNARE protein; n=3; Plasmodium|Rep: SNA... 36 0.84
UniRef50_A4VDV4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_A0CAU7 Cluster: Chromosome undetermined scaffold_162, w... 33 3.4
UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein; ... 33 4.5
UniRef50_UPI000038DFBA Cluster: hypothetical protein Faci_030015... 33 5.9
UniRef50_Q05FW5 Cluster: 5-methyltetrahydropteroyltriglutamate--... 33 5.9
UniRef50_Q4Y876 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q8TNB9 Cluster: Predicted protein; n=1; Methanosarcina ... 32 7.8
UniRef50_Q8Q0I0 Cluster: Type IIS restriction enzyme; n=6; cellu... 32 7.8
>UniRef50_Q7QWA1 Cluster: GLP_177_26570_34507; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_177_26570_34507 - Giardia lamblia
ATCC 50803
Length = 2645
Score = 35.9 bits (79), Expect = 0.63
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 281 CWNFXIKTFYHFLVVYNYNVIKLINHLIDINKILQ--FLFHDLKVYTFN 141
C + ++ Y L +YN +KL N L+ + K+ ++ HDLK++T N
Sbjct: 1532 CSEWLLEQNYEMLTAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTAN 1580
>UniRef50_Q0ZAG3 Cluster: SNARE protein; n=3; Plasmodium|Rep: SNARE
protein - Plasmodium falciparum
Length = 967
Score = 35.5 bits (78), Expect = 0.84
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -2
Query: 311 MCLSIEKIYECWNFXIKTFYHFLVVYN--YNVIKLINHLIDINKILQFLFH--DLKVYTF 144
+C +IE + EC+N I Y+ L +YN N I L+N I INK + H LK YT+
Sbjct: 372 ICSTIELLLECFNTYIWAGYYNLNIYNKLMNSI-LLNKFIYINKNTIYTQHYEQLKNYTY 430
Query: 143 NPWKFLHSIPCAI 105
+ + + P I
Sbjct: 431 MEYDYNINYPIKI 443
>UniRef50_A4VDV4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 231
Score = 33.9 bits (74), Expect = 2.6
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 248 FLVVYNYNVIKLINHLIDINKILQFLFHDLKVYT-FNPWKFLHSIPCAIFMYVCMYFGNF 72
F++ N+++ + H I IL ++ +++ F+ LH + C + +YVC+YF NF
Sbjct: 149 FIIFVNFSLFYYLFHYFKIQSILFLMYLIRWLFSLFHQRNSLHLLNCYLTVYVCLYF-NF 207
>UniRef50_Q380W9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 232
Score = 33.5 bits (73), Expect = 3.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 184 YYSFYFMI*RC-IHLIHGSFYIPYHVLFSCMYVCILEISSIQQFYIHCY*YYV 29
YY Y+ I C I + ++Y Y+ + C Y I + FY H Y YYV
Sbjct: 66 YYCSYYNIRICTITTLSYNYYYHYYYYYYCSYYNIRIYTPTTLFYYHYYYYYV 118
>UniRef50_A0CAU7 Cluster: Chromosome undetermined scaffold_162, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_162, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1263
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 287 YECWNFXIKTFYHFLVVYNYNVIKLINHLIDINKILQFL 171
++C+NF KTFY+F + N N + ++ NKILQ L
Sbjct: 1024 WDCYNF--KTFYNFYIEVNENTPNINGNIRGNNKILQLL 1060
>UniRef50_UPI00006CFA43 Cluster: Chitin synthase family protein;
n=1; Tetrahymena thermophila SB210|Rep: Chitin synthase
family protein - Tetrahymena thermophila SB210
Length = 1312
Score = 33.1 bits (72), Expect = 4.5
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -3
Query: 181 YSFYFMI*RCIHLIHGSFYIPYHVLFSCMYVCILEI 74
+SF+F + I +I+ + Y+ Y +LF C++ CI +I
Sbjct: 622 FSFFFFL--PIQIIYFTLYLIYFILFKCVFKCIFKI 655
>UniRef50_UPI000038DFBA Cluster: hypothetical protein Faci_03001523;
n=2; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001523 - Ferroplasma acidarmanus fer1
Length = 387
Score = 32.7 bits (71), Expect = 5.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 73 KFPKYIHTYMKIAHGMECKNFHGLNVYTFKS*NKNCNILLMS 198
+F + I Y I G+E + +N+YT+ N NCNI+L++
Sbjct: 51 EFLRIIKKYKNIKLGIESTGIYHVNLYTYLI-NNNCNIILLN 91
>UniRef50_Q05FW5 Cluster:
5-methyltetrahydropteroyltriglutamate--homocysteine S-
methyltransferase; n=1; Candidatus Carsonella ruddii
PV|Rep:
5-methyltetrahydropteroyltriglutamate--homocysteine S-
methyltransferase - Carsonella ruddii (strain PV)
Length = 700
Score = 32.7 bits (71), Expect = 5.9
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 305 LSIEKIYECWNFXIKTFYHFLVVYNYNVIKLINHLI--DINKILQFLFHDLKVYTFNPWK 132
L+I K+ + +N T YH++V N+N +K++N+ + DI I+Q L K+ F P
Sbjct: 102 LNISKMTKFFN----TNYHYIVPKNFNNLKIVNNTLFKDIKNIIQ-LGLIPKLILFGPVS 156
Query: 131 FLH 123
FL+
Sbjct: 157 FLY 159
>UniRef50_Q4Y876 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 189
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 4 NRYXNFYLQRNINNSEYKIAEYWKFPKYIHTYMKIAH 114
N+ ++Y+ + N+S Y I EY FPKY + +KI +
Sbjct: 127 NKISDYYINISTNDSLYNIVEY--FPKYFYNTIKIMY 161
>UniRef50_Q8TNB9 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 1161
Score = 32.3 bits (70), Expect = 7.8
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 239 VYNYNVIKLINHLIDINKILQFLFHDLKVYT--FNPWKFLHS 120
+Y Y ++KL N+L NKI+ FLF ++ YT P K LH+
Sbjct: 147 LYKYLILKLCNYL---NKIMPFLFEKIEDYTELLFPDKLLHT 185
>UniRef50_Q8Q0I0 Cluster: Type IIS restriction enzyme; n=6; cellular
organisms|Rep: Type IIS restriction enzyme -
Methanosarcina mazei (Methanosarcina frisia)
Length = 1165
Score = 32.3 bits (70), Expect = 7.8
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 239 VYNYNVIKLINHLIDINKILQFLFHDLKVYT--FNPWKFLHS 120
+Y Y ++KL N+L NKI+ FLF ++ YT P K LH+
Sbjct: 147 LYKYLILKLCNYL---NKIMPFLFEKIEDYTELLFPDKLLHT 185
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,220,863
Number of Sequences: 1657284
Number of extensions: 7751142
Number of successful extensions: 18228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18204
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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