Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D12
         (555 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0028 - 18468407-18468859,18469070-18469228,18469361-18470227     28   5.8  
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609...    27   7.6  

>11_05_0028 - 18468407-18468859,18469070-18469228,18469361-18470227
          Length = 492

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = -2

Query: 299 IEKIYECWNFXIKTFYHFLVVYNYNVIKLINHLIDINKILQFLFHDLKVYTF 144
           + K+ +C    +K      ++ +  +++LI+H++D    L+FL  D ++Y F
Sbjct: 360 LRKLPKCNYSNLKNVKITGLMSSKTLVELISHILDNTPSLEFLTLDTRIYGF 411


>03_05_1150 -
           30758981-30759778,30759970-30760729,30760823-30760920,
           30761997-30762521
          Length = 726

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 138 MEVFTFHTMCYFHVCMYVFWKFPVFSNFIFT 46
           M ++    +CY+    +   KFP+FSN +FT
Sbjct: 316 MFIYLIVPLCYWKFDTFDARKFPIFSNQLFT 346


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,233,448
Number of Sequences: 37544
Number of extensions: 169687
Number of successful extensions: 306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)