Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D12
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine re...    29   3.0  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    28   5.2  
AF039720-11|AAK68359.1|  260|Caenorhabditis elegans Hypothetical...    28   5.2  
AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U41991-11|AAA83351.2|  199|Caenorhabditis elegans Hypothetical p...    27   9.1  
U28928-13|AAL16321.1|  339|Caenorhabditis elegans Hypothetical p...    27   9.1  
AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical
           protein C08B11.8 protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = -2

Query: 257 FYHFLVVYNYNVIKLINHLIDINKILQFLFHDLKVYTFNPWKFLHSIPCAIFMYVCMYF 81
           F +F+V Y Y   + I+H++ I  ++ F    L++Y  +  +F H    A   + C++F
Sbjct: 429 FAYFVVSYAYTAPRKISHILTI--LIGFAICILELYGPSNQRFPHIYQLANAFFSCVHF 485


>AC006680-2|AAK72302.1|  309|Caenorhabditis elegans Serpentine
           receptor, class x protein9 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -2

Query: 266 IKTFYHFLVVYNYNVIKLINHLIDINKILQFLFHDLKVYTFNPWKFLHS--IPCAIFMYV 93
           +  F+ F+ +  + +  L+   + IN+ L   F++  ++TFN    + +  I  A+F   
Sbjct: 82  LSVFFGFIFLSGWFMENLLQPTMAINRFLVITFNNHNIFTFNKTMLMMTVLISAALFSAA 141

Query: 92  CMYF 81
           C  +
Sbjct: 142 CAQY 145


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 233  NYNVIKLINHLIDINKILQFLFHDLKVYTFNPWKFLHSIP 114
            ++  IKL NH I++N I Q +    ++ + +P++   SIP
Sbjct: 1298 DFKKIKLPNHFINLNHIQQRILFLSRMTSSDPFRLEFSIP 1337


>AF039720-11|AAK68359.1|  260|Caenorhabditis elegans Hypothetical
           protein F33D11.12 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 9/37 (24%), Positives = 23/37 (62%)
 Frame = -2

Query: 311 MCLSIEKIYECWNFXIKTFYHFLVVYNYNVIKLINHL 201
           +C+ +  +Y    +   T ++F+V  +++V+ +I+HL
Sbjct: 15  VCVFLVMLYSWETYPFHTIFNFIVFESFSVLAVISHL 51


>AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical
           protein Y39C12A.7 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 305 LSIEKIYECWNFXIKTFYHFLVVYNYNVIKLINHLID 195
           +SI  +  C  F   TFY FLV++  N+I  I ++I+
Sbjct: 128 ISIISVLVCTQFST-TFYPFLVLFMSNIISYIVNIIN 163


>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
           protein B0464.2 protein.
          Length = 1150

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 10  YXNFYLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMEC 126
           Y  +Y  R  NN E+ +A Y     YIH   +I   ++C
Sbjct: 340 YKYYYQARQANNGEHTLAHYGLGQMYIHR-NEIEEAIKC 377


>U41991-11|AAA83351.2|  199|Caenorhabditis elegans Hypothetical
           protein C42D4.13 protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 130 FYIPYHVLFSCMYVCILEISSIQQFYIHC 44
           F+ P+ ++ +  Y+ IL I ++  F+IHC
Sbjct: 9   FFHPFSII-TMKYLSILSIFTLSMFHIHC 36


>U28928-13|AAL16321.1|  339|Caenorhabditis elegans Hypothetical
           protein C44B7.2b protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
 Frame = -3

Query: 154 CIHLIHGSFY--IPYHVLFS--CMYVCILEISSIQQFYIHCY 41
           C+ +I+G  +  I   +LF+  C Y  +L +SS + +Y+H Y
Sbjct: 288 CVMMIYGLEHGKINCDMLFNILCQYGNVLRVSSSRVYYLHVY 329


>AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.10 protein.
          Length = 277

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 248 FLVVYNYNVIKLINHLIDINKILQFLFHDLKV 153
           FL+ Y  ++   INH++++ KI +   H LKV
Sbjct: 93  FLIAYKLDIRDCINHVLEVYKISK--LHTLKV 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,480,910
Number of Sequences: 27780
Number of extensions: 204239
Number of successful extensions: 524
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)