Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_D12
(555 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 6.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 8.4
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 7 RYXNF--YLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
+Y N+ Y N NN+ YK +Y+ + + + C NF
Sbjct: 90 KYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNF 134
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 7 RYXNF--YLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
+Y N+ Y N NN+ YK +Y+ + + + C NF
Sbjct: 90 KYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNF 134
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 7 RYXNF--YLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
+Y N+ Y N NN+ YK +Y+ + + + C NF
Sbjct: 90 KYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNF 134
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 7 RYXNF--YLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
+Y N+ Y N NN+ YK +Y+ + + + C NF
Sbjct: 90 KYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNF 134
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 103 KIAHGMECKNFHGLNVYTFKS*NKNCNILLMSIKWLINFI 222
KI + K H N Y + N N N + + IN+I
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 103 KIAHGMECKNFHGLNVYTFKS*NKNCNILLMSIKWLINFI 222
KI + K H N Y + N N N + + IN+I
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 103 KIAHGMECKNFHGLNVYTFKS*NKNCNILLMSIKWLINFI 222
KI + K H N Y + N N N + + IN+I
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 151 IHLIHGSFYIPYHVLFSCMY 92
I+ GSFYIP V+ Y
Sbjct: 204 IYATLGSFYIPLFVMIQVYY 223
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 6.3
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 103 KIAHGMECKNFHGLNVYTFKS*NKNCNILLMSIKWLINFI 222
KI + + H N Y + N N N + + IN+I
Sbjct: 80 KIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/44 (25%), Positives = 16/44 (36%)
Frame = +1
Query: 4 NRYXNFYLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
N Y Y N NN+ Y Y+ + + + C NF
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNF 135
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.4
Identities = 11/44 (25%), Positives = 16/44 (36%)
Frame = +1
Query: 4 NRYXNFYLQRNINNSEYKIAEYWKFPKYIHTYMKIAHGMECKNF 135
N Y Y N NN+ Y Y+ + + + C NF
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNF 135
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 99 HENSTWYGM*KLPWIKCI 152
HE S W + L W+ CI
Sbjct: 326 HEMSEWVKVVFLYWLPCI 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,337
Number of Sequences: 438
Number of extensions: 2985
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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