Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D11
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   2.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 94  RRLCVPYFRRLYLMIINSD 150
           RR C+ Y R  Y + INSD
Sbjct: 492 RRACMNYERFTYKININSD 510


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 94  RRLCVPYFRRLYLMIINSD 150
           RR C+ Y R  Y + INSD
Sbjct: 492 RRACMNYERFTYKININSD 510


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 253 QQRVPVQNYY*NYLKKVECKYEN 321
           QQ   V+NYY N   K   +Y N
Sbjct: 709 QQVQAVRNYYANLYTKYHGQYPN 731


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 121 RLYLMIINSDLYFRNLLLPTCFGNSLIAMSTA 216
           +LY+++I  +   R  ++PT +  +  +  TA
Sbjct: 901 KLYIILIRPERNVRQSMMPTRYSTTKSSAVTA 932


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,825
Number of Sequences: 438
Number of extensions: 2617
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)