Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D06
         (303 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      22   5.9  
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    22   5.9  
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    22   5.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   7.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    21   7.8  

>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 165 VIPMYTDISTKQRTHIYLHTTC--PYESVKF 251
           ++ M+ D++      IY H TC    E+++F
Sbjct: 303 ILRMFVDLNPDSEKIIYSHFTCATDTENIRF 333


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 165 VIPMYTDISTKQRTHIYLHTTC--PYESVKF 251
           ++ M+ D++      IY H TC    E+++F
Sbjct: 116 ILRMFVDLNPDSEKIIYSHFTCATDTENIRF 146


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 165 VIPMYTDISTKQRTHIYLHTTC--PYESVKF 251
           ++ M+ D++      IY H TC    E+++F
Sbjct: 117 ILRMFVDLNPDSEKIIYSHFTCATDTENIRF 147


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 180 CTWGLRSELMYVII*CYC 127
           C+W  R+ L   I  CYC
Sbjct: 800 CSWCKRNGLTICIEKCYC 817


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 287 VICF*HCACVWLEFYRFV 234
           + C   C  VWL+F  +V
Sbjct: 784 IFCVWDCCWVWLKFQEWV 801


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,084
Number of Sequences: 2352
Number of extensions: 5733
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)