Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D06
         (303 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    27   6.0  
BT023018-1|AAY55434.1|  281|Drosophila melanogaster IP08521p pro...    27   6.0  
AE014296-3749|AAN12212.1|  252|Drosophila melanogaster CG32461-P...    27   6.0  

>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 193 VLISVYMGITLRIDVCNYLMLLLSVW 116
           + +S+Y+ I L I +C YL + LS++
Sbjct: 29  IYLSIYLSIYLSIYLCIYLSISLSIY 54


>BT023018-1|AAY55434.1|  281|Drosophila melanogaster IP08521p
           protein.
          Length = 281

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 183 DISTKQRTHIYLHTTCPYESVKFEPNTRTVLKTNDNSN 296
           D+ST+ + H+Y   +  Y  ++    T    KT  N+N
Sbjct: 236 DLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNN 273


>AE014296-3749|AAN12212.1|  252|Drosophila melanogaster CG32461-PA
           protein.
          Length = 252

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 183 DISTKQRTHIYLHTTCPYESVKFEPNTRTVLKTNDNSN 296
           D+ST+ + H+Y   +  Y  ++    T    KT  N+N
Sbjct: 205 DLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNN 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,180,527
Number of Sequences: 53049
Number of extensions: 249201
Number of successful extensions: 857
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)