Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D05
         (659 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   122   6e-27
UniRef50_Q0RSY4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_A6GC45 Cluster: Serine/threonine protein kinase Pkn6; n...    33   6.1  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  122 bits (295), Expect = 6e-27
 Identities = 63/86 (73%), Positives = 63/86 (73%)
 Frame = -2

Query: 658 DAEGSADSAAIIPXMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADIX 479
           DAEGSADSAAIIP MVKKIDLAP VESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 
Sbjct: 150 DAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADIS 209

Query: 478 XXXXXXXXXXXXXXXXXXXXDIPVAP 401
                               DIPVAP
Sbjct: 210 PDAPKAEAKSADDSATTAKDDIPVAP 235



 Score = 34.3 bits (75), Expect = 2.6
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -2

Query: 646 SADSAAIIPXMVKKIDLAPNVESDAA---AVPEIKTPEAADAPKLADNPVDEDKPADI 482
           S D    IP   KK D+AP  +SD A    VPE+KT E     K ++ P  E K ADI
Sbjct: 62  SNDEVPAIPE-AKKDDIAPE-DSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADI 117


>UniRef50_Q0RSY4 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 615

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 604 IDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 485
           +DL  +  +D  A  ++  P  ADAP   D P D D PAD
Sbjct: 204 VDLDLDAPADLDAPADLDAPADADAPADLDAPADRDAPAD 243


>UniRef50_A6GC45 Cluster: Serine/threonine protein kinase Pkn6; n=1;
           Plesiocystis pacifica SIR-1|Rep: Serine/threonine
           protein kinase Pkn6 - Plesiocystis pacifica SIR-1
          Length = 609

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 658 DAEGSADSAAIIPXMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 488
           D   + D A  +P    +   AP   + A   PE     A + P  AD PV ED+PA
Sbjct: 452 DEAPAKDEAPTMPAAPVEPSPAPTQPAPAEPAPEEPAEPAPEEPAPADEPVVEDEPA 508


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,479,933
Number of Sequences: 1657284
Number of extensions: 6818547
Number of successful extensions: 19018
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18907
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)