Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D04
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.88 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.88 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   6.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -3

Query: 425 ILVLLFNSILSYELS--IALNRYRF 357
           +LV++FNS LSY+ S  + + R RF
Sbjct: 168 LLVMIFNSALSYKASEIVVMLRSRF 192



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 449 IEPTEIFSDCSFQCTRCNSDSNGL 520
           ++  +IF   +F CTR N  S+ L
Sbjct: 18  LQHNQIFGFVTFTCTRSNFRSSKL 41


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -3

Query: 425 ILVLLFNSILSYELS--IALNRYRF 357
           +LV++FNS LSY+ S  + + R RF
Sbjct: 186 LLVMIFNSALSYKASEIVVMLRSRF 210



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 449 IEPTEIFSDCSFQCTRCNSDSNGL 520
           ++  +IF   +F CTR N  S+ L
Sbjct: 36  LQHNQIFGFVTFTCTRSNFRSSKL 59


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 426 VIFTVNDLLNQLKYLAIVASNVRVAIRTVMVCIFA 530
           + F  +DL  +L+Y   V S++      +  CIFA
Sbjct: 77  ISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFA 111


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 426 VIFTVNDLLNQLKYLAIVASNVRVAIRTVMVCIFA 530
           + F  +DL  +L+Y   V S++      +  CIFA
Sbjct: 77  ISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFA 111


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 435 TVNDLLNQLKYLAIVASNVRVAIRTVMVCIFAGVRAVRDTST 560
           ++  + N L+ +    S   + +RTV +C+F G   V D ST
Sbjct: 309 SLRQMKNNLERIYFYWSFGFLIVRTVCLCLFGG--KVNDEST 348


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 435 TVNDLLNQLKYLAIVASNVRVAIRTVMVCIFAGVRAVRDTST 560
           ++  + N L+ +    S   + +RTV +C+F G   V D ST
Sbjct: 309 SLRQMKNNLERIYFYWSFGFLIVRTVCLCLFGG--KVNDEST 348


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 310 KNRVLFYSIMYKFSH 266
           +N + F  +MYK SH
Sbjct: 7   RNDIRFLKVMYKLSH 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,191
Number of Sequences: 336
Number of extensions: 4347
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)