Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D03
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    27   0.061
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   1.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   3.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   9.2  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    19   9.2  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    19   9.2  

>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 26.6 bits (56), Expect = 0.061
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 133 PAENWGTEDADDEDVSVWEDXLGRRRHPR 47
           PA +  + D  D D+  W+  L  + HPR
Sbjct: 28  PANSLASTDIGDVDLEFWDLDLNAQNHPR 56


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 64  FPXCLPKPIHLHHQRLLYP--NFPQEILRTRHPLLANQGLLSVCQPLYCDDY*NKEISLI 237
           F   LP P H HHQ    P    P +I    +PL  NQ L   C      D   KE   I
Sbjct: 731 FDVKLPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ-LTGQCVRNDSSDTNGKETRSI 786

Query: 238 IA 243
           I+
Sbjct: 787 IS 788


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +1

Query: 64  FPXCLPKPIHLHHQRLLYP--NFPQEILRTRHPLLANQGLLSVCQPLYCDDY*NKEISLI 237
           F   LP P H HHQ    P    P +I    +PL  NQ L   C      D   KE   I
Sbjct: 623 FDVKLPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ-LTGQCVRNDSSDTNGKETRSI 678

Query: 238 IA 243
           I+
Sbjct: 679 IS 680


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 64 FPXCLPKPI 90
          +P C+PKPI
Sbjct: 52 YPGCVPKPI 60


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 14/66 (21%), Positives = 26/66 (39%)
 Frame = -2

Query: 255 SYISCYNK*YFLISIIITV*WLTNRK*TLVC*KRMTSSKNFLRKIGVQKTLMMKMYRFGK 76
           S   CY     ++ I+  + WL +     V    + + K FL  I    +++  +  F  
Sbjct: 42  SLAKCYACLLMVVKILWVIYWLQDDALKSVYASLLCTEKIFLFAIYTNLSILTTVTIFKS 101

Query: 75  TXWEDD 58
             W+ D
Sbjct: 102 AFWDVD 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 121 NFPQEILRTRHPLLANQGLLSVCQPLYCDDY 213
           N+  +     H L A+  LLS  Q L  D Y
Sbjct: 210 NYSTDYSSLTHSLAASNHLLSSGQHLLQDTY 240


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 133 PAENWGTEDADDED 92
           P E W     DDED
Sbjct: 17  PTERWQRLSFDDED 30


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 133 PAENWGTEDADDED 92
           P E W     DDED
Sbjct: 17  PTERWQRLSFDDED 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,385
Number of Sequences: 336
Number of extensions: 1218
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)