Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D02
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.36 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 15/63 (23%), Positives = 26/63 (41%)
 Frame = -2

Query: 506  KTFVPGGNMPDPKVTNLTPQEIHKIREAIKNASSLQEVERLTRMLQSGQIPGQKPLQPVT 327
            +  VPG +  +  V  L P   + IR   +N     E      ++ + ++PG  P     
Sbjct: 946  RVLVPG-DQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIRV 1004

Query: 326  QTN 318
            +TN
Sbjct: 1005 ETN 1007


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 411 CILDCFSDLMDFLRCKICNFRIRHISTRYKGL 506
           C++D +    +FL   + N  IR   +RYK L
Sbjct: 175 CLMDVY---YEFLLISLINILIRSFKSRYKDL 203


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 393 RTSDQNVAVWSDSRTKTFTACD 328
           RT+D  + +WSD + K+  A D
Sbjct: 403 RTTDTFLDLWSDYQNKSLAAFD 424


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 589 LIFLKS--NNLSSGILNATYAL*WFLLATGLCMSDNVRSFGNV 711
           LIFL +    L  GI+N+T  L + L+ T   M +N+ + G+V
Sbjct: 86  LIFLVNWYPRLIIGIMNSTLNLIFLLIQTRFEMINNIITRGDV 128


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -1

Query: 192 RIKKMKEFYYTFIF*AERKLE-TTKLG*EDRYYTSLQKNR 76
           R++  KEFYY+      RK E    LG  +R      +NR
Sbjct: 168 RVELEKEFYYSRYITIRRKAELANSLGLSERQVKIWFQNR 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,732
Number of Sequences: 336
Number of extensions: 3570
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)