Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D01
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3; P...    35   2.3  

>UniRef50_Q2V2M6 Cluster: CGMP-specific phosphodiesterase; n=3;
           Plasmodium|Rep: CGMP-specific phosphodiesterase -
           Plasmodium falciparum
          Length = 884

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +2

Query: 251 HTNELKNDKINNYYKEDIDEICITIKNR*HLFRNCIYKMLFLTYIYSFFSWVFISIV 421
           H N   + K NNY   +IDE    IKN  + + N IY+ +F  Y  SF+ ++  +++
Sbjct: 81  HLNNSSSSKHNNYNVNNIDE--KNIKNDYNTYHN-IYEQIFFKYNPSFYEYLMFTLM 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,220,130
Number of Sequences: 1657284
Number of extensions: 11391882
Number of successful extensions: 21723
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21721
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)