Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_D01
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.82 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.8  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 345 LEIVFIKCYF*HIFT 389
           L++VF+ CYF ++FT
Sbjct: 141 LQLVFVFCYFIYLFT 155


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 111 IILYVICVFHVLGTYVGTPINNKPAPLRLDP 19
           +++  + +  V+  +V  P    P PLR DP
Sbjct: 444 LLVSKVALASVVKDFVFDPTERTPVPLRFDP 474


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 30  SVELVYY*LEFLHTYLTHGIHISRIR*LSFQVLKDSTGYFHLTILS*ALFF 182
           S  +VY     L T+L  G  + +I      +L+ +  +F LT +  +L F
Sbjct: 52  SARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLF 102


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 30  SVELVYY*LEFLHTYLTHGIHISRIR*LSFQVLKDSTGYFHLTILS*ALFF 182
           S  +VY     L T+L  G  + +I      +L+ +  +F LT +  +L F
Sbjct: 52  SARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLF 102


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 LGVYFNCLQF 429
           LG YFNC+ F
Sbjct: 274 LGTYFNCIMF 283


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 LGVYFNCLQF 429
           LG YFNC+ F
Sbjct: 274 LGTYFNCIMF 283


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 LGVYFNCLQF 429
           LG YFNC+ F
Sbjct: 274 LGTYFNCIMF 283


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 LGVYFNCLQF 429
           +G YFNC+ F
Sbjct: 274 IGTYFNCIMF 283


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 LGVYFNCLQF 429
           +G YFNC+ F
Sbjct: 274 IGTYFNCIMF 283


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 367 VIFDIYLLILQLGVYFNCLQFSCP 438
           +I  I LL+L   +   CL  +CP
Sbjct: 4   IITSIILLVLSESLVSGCLITNCP 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,011
Number of Sequences: 336
Number of extensions: 3522
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)