Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C20
         (546 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0EC66 Cluster: Chromosome undetermined scaffold_89, wh...    35   1.4  
UniRef50_A4KR13 Cluster: Putative uncharacterized protein; n=10;...    33   5.7  

>UniRef50_A0EC66 Cluster: Chromosome undetermined scaffold_89, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_89,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1772

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 26/99 (26%), Positives = 45/99 (45%)
 Frame = +2

Query: 134 CINYTKNIILRHP**KYQSNAFILKAICQVRVQAISRLTDGYYSEIVFFLNFTLERERTK 313
           C++ +  I L H     Q   F +  IC   +  + ++   Y  + +F     +E+++TK
Sbjct: 327 CLSASLTISLSHQFQLTQMQLFSMCLICIPILTKMIKVIFNYVIQQIFDQQLYMEKKKTK 386

Query: 314 IT*RQSSRASRYSFFSLQNFL*NCRVFNKKRQQSTTLLN 430
              R SSR S++    LQ F+    +   K+QQ   L N
Sbjct: 387 QQKRSSSRRSQFVEDDLQPFVIEKEMQEIKKQQIEALKN 425


>UniRef50_A4KR13 Cluster: Putative uncharacterized protein; n=10;
           Francisella tularensis|Rep: Putative uncharacterized
           protein - Francisella tularensis subsp. holarctica 257
          Length = 205

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 278 KKQFLSNNHQSIYLLLVHGLDKSLSR*KHLTDIFIKDGAILY 153
           KK F  NN  + Y L+   LDK + R   +TD+F+++  I +
Sbjct: 149 KKHFNENNKDAFYRLIRRHLDKDIPR--QITDLFVENNIIFF 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,139,855
Number of Sequences: 1657284
Number of extensions: 8315845
Number of successful extensions: 18084
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18072
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)