Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C20
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061426-1|AAL28974.1|  376|Drosophila melanogaster LD35843p pro...    28   9.5  
AY060766-1|AAL28314.1|  458|Drosophila melanogaster GH22974p pro...    28   9.5  
AE013599-3878|AAF47210.1|  706|Drosophila melanogaster CG13579-P...    28   9.5  
AE013599-3774|AAF47138.1|  458|Drosophila melanogaster CG11388-P...    28   9.5  
AE013599-2074|AAF58127.1|  376|Drosophila melanogaster CG8187-PA...    28   9.5  

>AY061426-1|AAL28974.1|  376|Drosophila melanogaster LD35843p
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 59  LEGTFHIYTSTMSINVQHDLLHCIHCINYTKN-IILRHP 172
           +E   HI  +   + ++++L H  H +N +KN  +L +P
Sbjct: 298 IEQNLHIEVTAPEVKLENELEHVAHALNESKNKFVLSNP 336


>AY060766-1|AAL28314.1|  458|Drosophila melanogaster GH22974p
           protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 544 RRARVRSRPWSWAWSLKR 491
           RR  +R +P SWAW+L R
Sbjct: 45  RRNSIRQKPKSWAWTLLR 62


>AE013599-3878|AAF47210.1|  706|Drosophila melanogaster CG13579-PA
           protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 40  IVNVINTRRYISHLHQHNVY*CTTRPTSLYSLYKLHKKYNIAPSL 174
           ++ VIN RRY +++HQ   Y  T+   +  ++  L   + + P+L
Sbjct: 58  VIFVINNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGLMPAL 102


>AE013599-3774|AAF47138.1|  458|Drosophila melanogaster CG11388-PA
           protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 544 RRARVRSRPWSWAWSLKR 491
           RR  +R +P SWAW+L R
Sbjct: 45  RRNSIRQKPKSWAWTLLR 62


>AE013599-2074|AAF58127.1|  376|Drosophila melanogaster CG8187-PA
           protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 59  LEGTFHIYTSTMSINVQHDLLHCIHCINYTKN-IILRHP 172
           +E   HI  +   + ++++L H  H +N +KN  +L +P
Sbjct: 298 IEQNLHIEVTAPEVKLENELEHVAHALNESKNKFVLSNP 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,677,320
Number of Sequences: 53049
Number of extensions: 379837
Number of successful extensions: 1644
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)