BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_pT_C09 (777 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0008 + 84955-85048,85165-85225,85375-85426,85554-85661,856... 146 2e-35 10_08_0939 + 21696941-21697049,21697171-21697255,21698385-216984... 56 2e-08 04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609... 29 3.1 04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533... 29 5.4 08_01_0588 + 5222536-5222656,5222887-5223440 28 7.2 03_04_0143 + 17670103-17670430,17670511-17670785,17670897-176713... 28 9.5 01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 28 9.5 >03_01_0008 + 84955-85048,85165-85225,85375-85426,85554-85661, 85662-85715,86140-86190,86348-86410,87048-87113, 87190-87228,87493-87615,88251-88343,88437-88661 Length = 342 Score = 146 bits (354), Expect = 2e-35 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Frame = -1 Query: 681 KLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCD 502 +LSNG+N++G SQG RAVV+ C P +KN +SLGG H G +P CG+ C Sbjct: 111 ELSNGYNIVGLSQGNLIGRAVVEFCDDG-PPVKNFISLGGPHAGTASVPLCGS--GIFCI 167 Query: 501 DVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTV--NKTYIQNL 328 L+ Y+ +VQ L + Y P D Y FL +NN N TY + Sbjct: 168 LADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYKERF 227 Query: 327 NNLERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGK 148 ++LE VL+MF +D+++ P+ET WFG+Y G + ++ +++K+Y++D +GLK +D G+ Sbjct: 228 SSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDDEGR 287 Query: 147 LIFLSTPGDHLRFTEEWMIKNIIKPYL 67 + F+S PG HL ++ M+K I+ PYL Sbjct: 288 VKFVSVPGGHLGISKTDMMKYIV-PYL 313 >10_08_0939 + 21696941-21697049,21697171-21697255,21698385-21698457, 21698553-21698609,21698660-21698713,21699196-21699246, 21699441-21699503,21700453-21700518,21700625-21700663, 21702190-21702271,21703479-21703536,21703698-21703914, 21704248-21704697 Length = 467 Score = 56.4 bits (130), Expect = 2e-08 Identities = 33/103 (32%), Positives = 53/103 (51%) Frame = -1 Query: 726 NLQVEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGI 547 NL Y+C + +L G++++G SQG RAV++ C P +KN +S+GG H G Sbjct: 100 NLHHFYLCT-VKKMKELRKGYSIVGLSQGNLIGRAVIEYCDGG-PPVKNFISIGGPHAGT 157 Query: 546 YGIPHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDP 418 +P CG+ C + L+ Y+++VQ L + Y P Sbjct: 158 ASVPLCGS--GIVCVLIDALIKLEIYSNYVQAHLAPSGYLKIP 198 Score = 33.9 bits (74), Expect = 0.14 Identities = 12/27 (44%), Positives = 22/27 (81%) Frame = -1 Query: 204 SKIYLQDRLGLKKMDKAGKLIFLSTPG 124 +K+Y +D +GLK +++AG++ F+S PG Sbjct: 200 TKLYTEDWIGLKALEEAGRVKFVSVPG 226 >04_03_0858 + 20357519-20357573,20358072-20358119,20360675-20360922, 20361152-20361363,20361480-20361741,20361832-20362143 Length = 378 Score = 29.5 bits (63), Expect = 3.1 Identities = 25/106 (23%), Positives = 49/106 (46%) Frame = -1 Query: 702 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 523 E+LA + +L F +MGFS G + + + ++ H+L + + +G G+P Sbjct: 154 EELADNLQLGPKFYLMGFSMGGEIMWSCLKHISHRLAGVAILAPVGNYWWS--GLP---- 207 Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSV 385 + + + L + WV + L TYW + ++ + A+SV Sbjct: 208 -SNMSWHVWNQQLPQDKWAVWVSHHLPWLTYWWN--SQKLFPASSV 250 >04_03_0857 + 20352331-20352582,20352740-20352951,20353047-20353308, 20353418-20353726 Length = 344 Score = 28.7 bits (61), Expect = 5.4 Identities = 25/106 (23%), Positives = 49/106 (46%) Frame = -1 Query: 702 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 523 E+LA + +L F +MGFS G + + + ++ H+L + + +G G+P Sbjct: 121 EELADNLQLGPKFYLMGFSMGGEIMWSCLKHISHRLAGVAILGPVGNYWWS--GLP---- 174 Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSV 385 + + + L + WV + L TYW + ++ + A+SV Sbjct: 175 -SNVSWHAWNQQLPQDKWAVWVSHHLPWLTYWWN--SQKLFPASSV 217 >08_01_0588 + 5222536-5222656,5222887-5223440 Length = 224 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +2 Query: 626 RIN*HPCEKPMTLNPFDSFGSAANFSHTYST 718 R+N PC+ PM +N D F +AA F ST Sbjct: 42 RVNGFPCKNPMEVNS-DDFFNAAKFDMPRST 71 >03_04_0143 + 17670103-17670430,17670511-17670785,17670897-17671376, 17671454-17671849,17673215-17673289,17673939-17673960, 17674041-17674129,17675204-17675495,17676019-17676087, 17676394-17676572 Length = 734 Score = 27.9 bits (59), Expect = 9.5 Identities = 21/89 (23%), Positives = 36/89 (40%) Frame = -1 Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 343 L+H D++ AY S+ S+ +A HD LD+R A + + + T Sbjct: 469 LKHNRGDELGVFTPSHAYKSYQDISISRAPEQHDELDKRLLWAELSKTSRLLDDNTTGTN 528 Query: 342 YIQNLNNLERFVLVMFDNDSIVQPKETEW 256 + +++ L D D + KE W Sbjct: 529 ELNVVSSQHGEQLNAKDQDELQNIKEKVW 557 >01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798, 28085948-28086253,28086369-28086643,28087034-28087252, 28087486-28089015,28089236-28089397,28089512-28089666, 28090195-28091064,28091363-28091832,28091917-28091981, 28092105-28092448,28092531-28092710,28092817-28092920, 28093053-28093162,28093648-28093744,28094138-28094238, 28094324-28094476,28094561-28094674,28094795-28094884, 28094960-28095307 Length = 2157 Score = 27.9 bits (59), Expect = 9.5 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 726 NLQVEYVCEKLAADPKLSNGFNV 658 N++ E KLA +PK+SNG +V Sbjct: 1606 NMKAEKAAAKLAKEPKISNGVSV 1628 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,756,958 Number of Sequences: 37544 Number of extensions: 408669 Number of successful extensions: 925 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 897 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 921 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2080154268 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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