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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C09
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0008 + 84955-85048,85165-85225,85375-85426,85554-85661,856...   146   2e-35
10_08_0939 + 21696941-21697049,21697171-21697255,21698385-216984...    56   2e-08
04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609...    29   3.1  
04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533...    29   5.4  
08_01_0588 + 5222536-5222656,5222887-5223440                           28   7.2  
03_04_0143 + 17670103-17670430,17670511-17670785,17670897-176713...    28   9.5  
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857...    28   9.5  

>03_01_0008 +
           84955-85048,85165-85225,85375-85426,85554-85661,
           85662-85715,86140-86190,86348-86410,87048-87113,
           87190-87228,87493-87615,88251-88343,88437-88661
          Length = 342

 Score =  146 bits (354), Expect = 2e-35
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
 Frame = -1

Query: 681 KLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHETCD 502
           +LSNG+N++G SQG    RAVV+ C    P +KN +SLGG H G   +P CG+     C 
Sbjct: 111 ELSNGYNIVGLSQGNLIGRAVVEFCDDG-PPVKNFISLGGPHAGTASVPLCGS--GIFCI 167

Query: 501 DVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTV--NKTYIQNL 328
               L+    Y+ +VQ  L  + Y   P D   Y     FL  +NN      N TY +  
Sbjct: 168 LADSLIKMEIYSDYVQAHLAPSGYMKIPTDISDYLKGCRFLPKLNNELPGERNATYKERF 227

Query: 327 NNLERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGK 148
           ++LE  VL+MF +D+++ P+ET WFG+Y  G  + ++  +++K+Y++D +GLK +D  G+
Sbjct: 228 SSLENLVLIMFQDDAVLIPRETAWFGYYPDGGFDPVLPPQKTKLYMEDWIGLKTLDDEGR 287

Query: 147 LIFLSTPGDHLRFTEEWMIKNIIKPYL 67
           + F+S PG HL  ++  M+K I+ PYL
Sbjct: 288 VKFVSVPGGHLGISKTDMMKYIV-PYL 313


>10_08_0939 +
           21696941-21697049,21697171-21697255,21698385-21698457,
           21698553-21698609,21698660-21698713,21699196-21699246,
           21699441-21699503,21700453-21700518,21700625-21700663,
           21702190-21702271,21703479-21703536,21703698-21703914,
           21704248-21704697
          Length = 467

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -1

Query: 726 NLQVEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGI 547
           NL   Y+C  +    +L  G++++G SQG    RAV++ C    P +KN +S+GG H G 
Sbjct: 100 NLHHFYLCT-VKKMKELRKGYSIVGLSQGNLIGRAVIEYCDGG-PPVKNFISIGGPHAGT 157

Query: 546 YGIPHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDP 418
             +P CG+     C  +  L+    Y+++VQ  L  + Y   P
Sbjct: 158 ASVPLCGS--GIVCVLIDALIKLEIYSNYVQAHLAPSGYLKIP 198



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 12/27 (44%), Positives = 22/27 (81%)
 Frame = -1

Query: 204 SKIYLQDRLGLKKMDKAGKLIFLSTPG 124
           +K+Y +D +GLK +++AG++ F+S PG
Sbjct: 200 TKLYTEDWIGLKALEEAGRVKFVSVPG 226


>04_03_0858 +
           20357519-20357573,20358072-20358119,20360675-20360922,
           20361152-20361363,20361480-20361741,20361832-20362143
          Length = 378

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 25/106 (23%), Positives = 49/106 (46%)
 Frame = -1

Query: 702 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 523
           E+LA + +L   F +MGFS G + + + ++   H+L  +  +  +G       G+P    
Sbjct: 154 EELADNLQLGPKFYLMGFSMGGEIMWSCLKHISHRLAGVAILAPVGNYWWS--GLP---- 207

Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSV 385
             + +     + L    +  WV + L   TYW +   ++ + A+SV
Sbjct: 208 -SNMSWHVWNQQLPQDKWAVWVSHHLPWLTYWWN--SQKLFPASSV 250


>04_03_0857 +
           20352331-20352582,20352740-20352951,20353047-20353308,
           20353418-20353726
          Length = 344

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 25/106 (23%), Positives = 49/106 (46%)
 Frame = -1

Query: 702 EKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGA 523
           E+LA + +L   F +MGFS G + + + ++   H+L  +  +  +G       G+P    
Sbjct: 121 EELADNLQLGPKFYLMGFSMGGEIMWSCLKHISHRLAGVAILGPVGNYWWS--GLP---- 174

Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSV 385
             + +     + L    +  WV + L   TYW +   ++ + A+SV
Sbjct: 175 -SNVSWHAWNQQLPQDKWAVWVSHHLPWLTYWWN--SQKLFPASSV 217


>08_01_0588 + 5222536-5222656,5222887-5223440
          Length = 224

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 626 RIN*HPCEKPMTLNPFDSFGSAANFSHTYST 718
           R+N  PC+ PM +N  D F +AA F    ST
Sbjct: 42  RVNGFPCKNPMEVNS-DDFFNAAKFDMPRST 71


>03_04_0143 +
           17670103-17670430,17670511-17670785,17670897-17671376,
           17671454-17671849,17673215-17673289,17673939-17673960,
           17674041-17674129,17675204-17675495,17676019-17676087,
           17676394-17676572
          Length = 734

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/89 (23%), Positives = 36/89 (40%)
 Frame = -1

Query: 522 LRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 343
           L+H   D++       AY S+   S+ +A   HD LD+R   A     + + +  T    
Sbjct: 469 LKHNRGDELGVFTPSHAYKSYQDISISRAPEQHDELDKRLLWAELSKTSRLLDDNTTGTN 528

Query: 342 YIQNLNNLERFVLVMFDNDSIVQPKETEW 256
            +  +++     L   D D +   KE  W
Sbjct: 529 ELNVVSSQHGEQLNAKDQDELQNIKEKVW 557


>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
            28085948-28086253,28086369-28086643,28087034-28087252,
            28087486-28089015,28089236-28089397,28089512-28089666,
            28090195-28091064,28091363-28091832,28091917-28091981,
            28092105-28092448,28092531-28092710,28092817-28092920,
            28093053-28093162,28093648-28093744,28094138-28094238,
            28094324-28094476,28094561-28094674,28094795-28094884,
            28094960-28095307
          Length = 2157

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 726  NLQVEYVCEKLAADPKLSNGFNV 658
            N++ E    KLA +PK+SNG +V
Sbjct: 1606 NMKAEKAAAKLAKEPKISNGVSV 1628


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,756,958
Number of Sequences: 37544
Number of extensions: 408669
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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