Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C07
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.46 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.61 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.61 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.61 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.5  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 151 THKGTNMKCVKYLLCD*RVYSITC 222
           T K  N KCVKYL+ D      TC
Sbjct: 45  TWKCENQKCVKYLVEDEETSLATC 68


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -3

Query: 406 PKLSRYAPLHSVTVNASNMSYESSPFHHNNIVPEAV*AT 290
           P LS+Y  + +V       S++    HH+ + P AV  T
Sbjct: 193 PALSKYLDIINVMAYDLRGSWDGVTGHHSGLYPSAVDTT 231


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 157 YVYTRVTIRPNYLALFFLNYQVTNRSQI 74
           Y+Y  V +   +L LF  +Y+V NR  +
Sbjct: 221 YLYFDVIVISTFLQLFLEHYEVINRQTL 248


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 157 YVYTRVTIRPNYLALFFLNYQVTNRSQI 74
           Y+Y  V +   +L LF  +Y+V NR  +
Sbjct: 147 YLYFDVIVISTFLQLFLEHYEVINRQTL 174


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 357  PTCPMRAVPSTTTTSCQKQCEPH 289
            P  P  A+ STTT S   + +PH
Sbjct: 1397 PHAPQIALTSTTTNSLTFKLKPH 1419


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 439 QLSEDLTGPATPKLSRYAPLHSVTVNASNMSYESSPFHHNNIVPEAV*ATRTKFNF 272
           Q+ E +T       SRYA L+   +   +  +ES  ++H  I+ E V    + F +
Sbjct: 319 QIIELMTSVVKSLESRYADLNENFLQCQDEKFESFVYYH-RILGETVDLFNSLFGY 373


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 439 QLSEDLTGPATPKLSRYAP 383
           +L + +T  ATP +  YAP
Sbjct: 274 RLRKQITSAATPLVRSYAP 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,941
Number of Sequences: 336
Number of extensions: 2542
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)