Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C06
         (746 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29993| Best HMM Match : MORN (HMM E-Value=0.37)                    111   4e-25
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)                46   2e-05
SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0)                33   0.33 

>SB_29993| Best HMM Match : MORN (HMM E-Value=0.37)
          Length = 265

 Score =  111 bits (268), Expect = 4e-25
 Identities = 66/212 (31%), Positives = 104/212 (49%)
 Frame = -3

Query: 744 IGIEYRFGCYKEQKPEVCHLLADYLEAIKXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTX 565
           +G  ++  C   +K E CH LA++  A++ D  KA   +K  C E    +SC  +GN   
Sbjct: 66  LGDIFKHECELSRKKESCHQLAEFYLAVEKDVHKAKDTFKLACEELGLMESCFALGNLHL 125

Query: 564 IGRGREKGDPAEALIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSC 385
             +  E  DP EAL  F   CE    GAC +AG++  +     +I++D+ K      KSC
Sbjct: 126 TSK--ELKDPEEALRLFGIACENKQAGACNNAGLIYQSGIEQTHIKKDINKAMEFFGKSC 183

Query: 384 DQNDDMACHYLSGMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGN 205
            + +   C  LS +YL G                      I  D  +AF ++ + C++G+
Sbjct: 184 TEGNKNGCFNLSAIYLMGRDG-------------------IAKDMKKAFDYSMKGCQMGH 224

Query: 204 MFACANVSLMYKXGDGVEKNQDESKRFFEIAQ 109
            + CANVS MY  GDGV KN +E+ ++ ++A+
Sbjct: 225 PWGCANVSRMYALGDGVAKNPEEAAKYKKLAK 256


>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 652

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 18/52 (34%), Positives = 35/52 (67%)
 Frame = -3

Query: 267 LIKPDKXEAFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
           ++K D   AF++ K+A ++GN    + + LMY  G GV+KN +++ ++F++A
Sbjct: 575 VVKQDNKTAFKWFKKAADMGNPIGQSGLGLMYMFGKGVDKNYEKAFQYFKMA 626


>SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0)
          Length = 926

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -3

Query: 264 IKPDKXEAFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
           ++ D  ++F F K+A + G   A  NV + Y  G GV+ +   +  +F++A
Sbjct: 210 VQEDSCKSFEFHKKAADQGYASAQYNVGVHYFAGRGVQLDMKLAAEYFQLA 260


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,185
Number of Sequences: 59808
Number of extensions: 422017
Number of successful extensions: 894
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)