Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_C06
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015313-1|AAH15313.1| 231|Homo sapiens chromosome 1 open readi... 113 6e-25
AK022501-1|BAB14063.1| 231|Homo sapiens protein ( Homo sapiens ... 111 3e-24
AL117333-1|CAI22078.1| 593|Homo sapiens chromosome 20 open read... 36 0.12
AL109657-1|CAI22983.1| 593|Homo sapiens chromosome 20 open read... 36 0.12
AF198647-1|AAL40905.1| 794|Homo sapiens sel-1 protein. 32 1.9
AF052059-1|AAF29413.1| 794|Homo sapiens SEL1L protein. 32 1.9
AB024763-1|BAA89204.1| 794|Homo sapiens TSA305 protein. 32 1.9
AB020335-1|BAA87904.1| 794|Homo sapiens TSA305 protein. 32 1.9
BC002324-1|AAH02324.1| 194|Homo sapiens translocase of inner mi... 31 4.4
AK000830-1|BAA91392.1| 194|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF155330-1|AAD40106.1| 194|Homo sapiens putative membrane prote... 31 4.4
>BC015313-1|AAH15313.1| 231|Homo sapiens chromosome 1 open reading
frame 163 protein.
Length = 231
Score = 113 bits (272), Expect = 6e-25
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Frame = -3
Query: 738 IEYRFGCYKEQKPEVCHLLADYLEAIKXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTXIG 559
+E + CY E+ P+ C+ L DYLE I+ +F++AAKV K NC E + SC +G Y G
Sbjct: 22 VECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTG 81
Query: 558 RGREKGDPAEALIYFEKGCE---LNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKS 388
+G D A F CE AC + G+L + Q D+ K + ++
Sbjct: 82 KGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRA 141
Query: 387 CDQNDDMACHYLSGMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELG 208
CD +C LS M+L G P +D + A +++ +AC+LG
Sbjct: 142 CDGGYTSSCFNLSAMFLQGAPGFPKDMD-------------------LACKYSMKACDLG 182
Query: 207 NMFACANVSLMYKXGDGVEKNQDESKRFFEIAQSLQKAHE 88
+++ACAN S MYK GDGV+K++ +++ AQ L + +
Sbjct: 183 HIWACANASRMYKLGDGVDKDEAKAEVLKNRAQQLHREQQ 222
>AK022501-1|BAB14063.1| 231|Homo sapiens protein ( Homo sapiens
cDNA FLJ12439 fis, clone NT2RM1000127. ).
Length = 231
Score = 111 bits (267), Expect = 3e-24
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Frame = -3
Query: 738 IEYRFGCYKEQKPEVCHLLADYLEAIKXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTXIG 559
+E + CY E+ P+ C+ L DYLE I+ +F++AAKV K NC E + SC +G + G
Sbjct: 22 VECNYHCYHEKDPDGCYRLVDYLEGIRKNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTG 81
Query: 558 RGREKGDPAEALIYFEKGCE---LNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKS 388
+G D A F CE AC + G+L + Q D+ K + ++
Sbjct: 82 KGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRA 141
Query: 387 CDQNDDMACHYLSGMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELG 208
CD +C LS M+L G P +D + A +++ +AC+LG
Sbjct: 142 CDGGYTSSCFNLSAMFLQGAPGFPKDMD-------------------LACKYSMKACDLG 182
Query: 207 NMFACANVSLMYKXGDGVEKNQDESKRFFEIAQSLQKAHE 88
+++ACAN S MYK GDGV+K++ +++ AQ L + +
Sbjct: 183 HIWACANASRMYKLGDGVDKDEAKAEVLKNRAQQLHREQQ 222
>AL117333-1|CAI22078.1| 593|Homo sapiens chromosome 20 open reading
frame 50 protein.
Length = 593
Score = 36.3 bits (80), Expect = 0.12
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Frame = -3
Query: 660 KXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTXI-GRG----REKGDP---AEALIYFEKG 505
K E A V ++N +K+ GN + G G KG P AEAL YF+K
Sbjct: 247 KMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKA 306
Query: 504 CELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSGMYLTG 331
E P A G + + G I +D + + +A +YL+ MY TG
Sbjct: 307 AEKGWPDAQFQLGFMYYS---GSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATG 361
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 264 IKPDKXEAFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
+ + AF++ A GN + L+Y G GV N E+ ++F+ A
Sbjct: 256 VPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKA 306
>AL109657-1|CAI22983.1| 593|Homo sapiens chromosome 20 open reading
frame 50 protein.
Length = 593
Score = 36.3 bits (80), Expect = 0.12
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Frame = -3
Query: 660 KXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTXI-GRG----REKGDP---AEALIYFEKG 505
K E A V ++N +K+ GN + G G KG P AEAL YF+K
Sbjct: 247 KMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKA 306
Query: 504 CELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSGMYLTG 331
E P A G + + G I +D + + +A +YL+ MY TG
Sbjct: 307 AEKGWPDAQFQLGFMYYS---GSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATG 361
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 264 IKPDKXEAFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
+ + AF++ A GN + L+Y G GV N E+ ++F+ A
Sbjct: 256 VPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKA 306
>AF198647-1|AAL40905.1| 794|Homo sapiens sel-1 protein.
Length = 794
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 264 IKPDKXE-AFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
I P E A + K+A ++GN + + + Y G GV+ N D + ++F+ A
Sbjct: 426 IVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
>AF052059-1|AAF29413.1| 794|Homo sapiens SEL1L protein.
Length = 794
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 264 IKPDKXE-AFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
I P E A + K+A ++GN + + + Y G GV+ N D + ++F+ A
Sbjct: 426 IVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
>AB024763-1|BAA89204.1| 794|Homo sapiens TSA305 protein.
Length = 794
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 264 IKPDKXE-AFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
I P E A + K+A ++GN + + + Y G GV+ N D + ++F+ A
Sbjct: 426 IVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
>AB020335-1|BAA87904.1| 794|Homo sapiens TSA305 protein.
Length = 794
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 264 IKPDKXE-AFRFAKRACELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIA 112
I P E A + K+A ++GN + + + Y G GV+ N D + ++F+ A
Sbjct: 426 IVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
>BC002324-1|AAH02324.1| 194|Homo sapiens translocase of inner
mitochondrial membrane 22 homolog (yeast) protein.
Length = 194
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -3
Query: 348 GMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFACANVSLMYK 169
G++ G+ NV F+P +P + ++K +AK +G MF+C +
Sbjct: 88 GVFTAGIDTNV-GFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSCTECLIESY 146
Query: 168 XGDGVEKN 145
G KN
Sbjct: 147 RGTSDWKN 154
>AK000830-1|BAA91392.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ20823 fis, clone ADSE00282. ).
Length = 194
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -3
Query: 348 GMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFACANVSLMYK 169
G++ G+ NV F+P +P + ++K +AK +G MF+C +
Sbjct: 88 GVFTAGIDTNV-GFDPKDPYRTPTAKEVLKDMGQRGMSYAKNFAIVGAMFSCTECLIESY 146
Query: 168 XGDGVEKN 145
G KN
Sbjct: 147 RGTSDWKN 154
>AF155330-1|AAD40106.1| 194|Homo sapiens putative membrane protein
protein.
Length = 194
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 348 GMYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFAC 193
G++ G+ NV F+P +P + ++K +AK +G MF+C
Sbjct: 88 GVFTAGIDTNV-GFDPKDPYRTPTAKEVLKEHGQRGMSYAKNFAIVGAMFSC 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,528,352
Number of Sequences: 237096
Number of extensions: 2090218
Number of successful extensions: 3480
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3478
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -