Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_C06
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical pr... 134 5e-32
Z78063-4|CAB01505.1| 685|Caenorhabditis elegans Hypothetical pr... 37 0.013
U50829-1|AAC47113.1| 685|Caenorhabditis elegans SEL-1 protein. 37 0.013
U50828-1|AAC47112.1| 685|Caenorhabditis elegans sel-1 protein. 37 0.013
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 29 3.5
>Z69904-4|CAA93779.1| 249|Caenorhabditis elegans Hypothetical
protein ZK20.4 protein.
Length = 249
Score = 134 bits (325), Expect = 5e-32
Identities = 71/220 (32%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Frame = -3
Query: 744 IGIEYRFGCYKEQKPEVCHLLADYLEAIKXDFEKAAKVYKSNCLEYKFGKSCLXIGNYTX 565
IGIEYRFGCY+E++PE C LL +Y+EA++ +F+ A ++K NC E + KSC G Y
Sbjct: 23 IGIEYRFGCYEEKRPESCQLLGEYMEALQQNFQAAVAIFKKNCDENSYPKSCFKYGMYML 82
Query: 564 IGRGREKGDPAEALIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSC 385
G+ + ++ + + C+ N P C + + L + + D K ++++C
Sbjct: 83 AGKVGDDASLSKMIRPMKIACDANIPQGCRY--LSLVHWNGEKDRKADSEKAERYMRRAC 140
Query: 384 DQNDDMACHYLSGMYLTGVPXNVQDFNPHNPXKNKNIDYL----IKPDKXEAFRFAKRAC 217
+ D AC LS Y+ N + F + + K +D + D ++ +FA RAC
Sbjct: 141 ELEDGEACWLLSTWYM----GNKEKFKTNAAGEAKELDRAELGSLSRDMDKSLQFAIRAC 196
Query: 216 ELGNMFACANVSLMYKXGDGVEKNQDESKRFFEIAQSLQK 97
E+ +CANVS M+K GDGV K+ D++K++ + A+ + +
Sbjct: 197 EMDIPQSCANVSRMFKLGDGVPKDLDQAKKYADRAKEIME 236
>Z78063-4|CAB01505.1| 685|Caenorhabditis elegans Hypothetical
protein F45D3.5 protein.
Length = 685
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/144 (23%), Positives = 61/144 (42%)
Frame = -3
Query: 525 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 346
L Y++ + D A L G + A G G+N ++ + L + + A YL
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334
Query: 345 MYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFACANVSLMYKX 166
MYL G P +D+ K+ +YL+K + + + A A + MY
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375
Query: 165 GDGVEKNQDESKRFFEIAQSLQKA 94
G GV+KN +++ + ++ + A
Sbjct: 376 GKGVKKNYEKALKLLTLSADKKNA 399
>U50829-1|AAC47113.1| 685|Caenorhabditis elegans SEL-1 protein.
Length = 685
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/144 (23%), Positives = 61/144 (42%)
Frame = -3
Query: 525 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 346
L Y++ + D A L G + A G G+N ++ + L + + A YL
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334
Query: 345 MYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFACANVSLMYKX 166
MYL G P +D+ K+ +YL+K + + + A A + MY
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375
Query: 165 GDGVEKNQDESKRFFEIAQSLQKA 94
G GV+KN +++ + ++ + A
Sbjct: 376 GKGVKKNYEKALKLLTLSADKKNA 399
>U50828-1|AAC47112.1| 685|Caenorhabditis elegans sel-1 protein.
Length = 685
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/144 (23%), Positives = 61/144 (42%)
Frame = -3
Query: 525 LIYFEKGCELNDPGACLHAGMLLTATGPGVNIQRDVPKGYNCLKKSCDQNDDMACHYLSG 346
L Y++ + D A L G + A G G+N ++ + L + + A YL
Sbjct: 277 LEYYKMLADKGDTSAQLGLGQIYLAGGRGLN--QNFELAFRYLLAAAESGSADALTYLGK 334
Query: 345 MYLTGVPXNVQDFNPHNPXKNKNIDYLIKPDKXEAFRFAKRACELGNMFACANVSLMYKX 166
MYL G P +D+ K+ +YL+K + + + A A + MY
Sbjct: 335 MYLDGTPFTPKDY-------QKSFEYLMK------------SADKSSPSAQAVLGAMYMK 375
Query: 165 GDGVEKNQDESKRFFEIAQSLQKA 94
G GV+KN +++ + ++ + A
Sbjct: 376 GKGVKKNYEKALKLLTLSADKKNA 399
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -3
Query: 378 NDDMACHYLSGMYLTGVPXNVQDFNPHNPXKNKNIDYL-IKPDKXEAFRFA 229
NDD + HY + +Y NV FN N + YL KP+ E +A
Sbjct: 46 NDDGSLHYAAFLYANPPMKNVMKFNLFNVTNPDEVKYLGAKPELIEVGGYA 96
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = -3
Query: 699 EVCHLLADYLEAIKXDFEKAAKVYKSNCLEYKFGKSCLXIGN-YTXIGRGREKG-DPAEA 526
EVC + +YL+ + DF + +V +S + S IGN T + R KG +P +
Sbjct: 145 EVCAVNCEYLDKVNEDFWRCLQVERS-LSKPGHDYSKFAIGNKKTLLEDPRTKGIEPRDV 203
Query: 525 LIYFEKGCELNDPGACLHAG 466
L+ F K +D C G
Sbjct: 204 LLDFYKNWYSSDIMTCCIVG 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,252,876
Number of Sequences: 27780
Number of extensions: 327453
Number of successful extensions: 597
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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