Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C04
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.46 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.5  

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = -3

Query: 282 DVQVNQMRWQQ----QLHSLPATWQVISLVPVCQSTVDVMLCVRAKFELLS*NKXQGAIL 115
           ++Q +Q++W +     L S+P  +  I L  VC ST+  +      F+  S     G ++
Sbjct: 287 ELQASQIKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTVSWCELNFDWSSQVSKAGELI 346

Query: 114 LQ 109
            Q
Sbjct: 347 HQ 348


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 65 MKNREKHKFYYINMYSF 15
          +K +E+H FY I  Y++
Sbjct: 31 IKRQERHSFYKIYKYTY 47


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 600 RRSYWAKEVFSMVPVSII 653
           +RS+WA  +F ++  S+I
Sbjct: 135 KRSFWAVTIFLVLAASVI 152


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 629 EHLLGPV*SSYEHQCAFNLLSDD 561
           EHLLG + +    Q  FN+ S D
Sbjct: 133 EHLLGHLQTDLMGQSIFNITSPD 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,596
Number of Sequences: 336
Number of extensions: 3729
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)