Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C01
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 462 YVGASFQIYGCSETI 506
           Y+G SF  Y C+ TI
Sbjct: 147 YIGRSFTYYVCNTTI 161


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 258 IYWLFLLCIFY 226
           ++ LFLLCI+Y
Sbjct: 125 VHLLFLLCIYY 135



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = -3

Query: 291 YLKFDFVCTDRIYW---LFLLCIFY 226
           Y+   F C   I+    LFLLCI+Y
Sbjct: 263 YMHLLFCCAFIIFTMHLLFLLCIYY 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,827
Number of Sequences: 336
Number of extensions: 3008
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)