Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_C01
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   5.3  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   5.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    24   5.3  

>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 480 EN*HLHNILYLNFRDIRLDS*KKSLIYNY 394
           EN HLH I+YL  RD+ ++  +  L + Y
Sbjct: 109 ENKHLHPIIYL--RDVEVNEMRALLDFMY 135


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 492 CSETIIYTKLRDNFLTLFT-LLCKS 563
           CS  ++Y  L DNF   F  LLC++
Sbjct: 323 CSNPLLYGWLNDNFRKEFNELLCRT 347


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 255 YWLFLLCIFYLNTFP 211
           +WL LLC+ YL  +P
Sbjct: 19  FWLQLLCLKYLGLWP 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,132
Number of Sequences: 2352
Number of extensions: 10708
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)