Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B23
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    27   0.76 
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        26   1.0  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   5.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 149 VPIEKLQDRRNWRDLCLMRLSLLKKEMNKKYQSS*C 42
           VP+++ +    W D  L RL  +K+   + YQ+  C
Sbjct: 395 VPVQRPKPNPPWADRTLKRLKRVKRAAYRHYQTRRC 430


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 170 TPSFCFYLSSYAEPVPFHC*HDKLSLRIYQY 262
           T +F F  S  A+P  FHC H  + L IY Y
Sbjct: 403 TVAFSFRSSRPADPAMFHCNHPFVFL-IYDY 432


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 354 NIRYINNFVVNETPNFIKDCV 416
           ++RYIN++V N+T   I D V
Sbjct: 83  SVRYINSWVHNQTHGRIADIV 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,350
Number of Sequences: 2352
Number of extensions: 14315
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)