Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B23
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 164 6e-41
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 158 4e-39
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 36 0.028
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 34 0.11
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 29 2.4
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 2.4
Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical p... 29 3.2
AF100307-9|AAC68938.1| 321|Caenorhabditis elegans Hypothetical ... 29 4.3
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 28 5.7
U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC199170-3|ABO33262.1| 317|Caenorhabditis elegans Hypothetical ... 27 9.9
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 164 bits (398), Expect = 6e-41
Identities = 81/211 (38%), Positives = 119/211 (56%)
Frame = -3
Query: 698 FQNLDSVVDDNTIXXXXXXXXXXXXXSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTK 519
++ +D + D TI ++GL +K + ++ HPVNPP ++PL E+VPAPWT
Sbjct: 73 YKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFLPLTELVPAPWTS 132
Query: 518 PEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRLXXXXXXXXXXXXXVMS 339
+ + EIM + Q+PV L +E+ GFV+NR+Q+A+L E WRL VMS
Sbjct: 133 QDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIGVNDVDAVMS 192
Query: 338 EGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQL 159
GLG RYAF G ET HLNA G++ Y RY I V +MGP P T K N + E+L
Sbjct: 193 AGLGPRYAFNGTCETVHLNAFGVRDYFKRYAAGITAVLKDMGPIPDFTDEKVINKLEEEL 252
Query: 158 EKLVPIEKLQDRRNWRDLCLMRLSLLKKEMN 66
E + ++ + R+ L+ ++ LKK++N
Sbjct: 253 EPKMSTLNIRKHQAEREEKLVEIAKLKKDLN 283
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 158 bits (383), Expect = 4e-39
Identities = 80/211 (37%), Positives = 119/211 (56%)
Frame = -3
Query: 698 FQNLDSVVDDNTIXXXXXXXXXXXXXSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTK 519
++ +D + D TI ++GL +K + ++ HPVNPP ++PL E+VPAPWT
Sbjct: 73 YKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFLPLTELVPAPWTS 132
Query: 518 PEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRLXXXXXXXXXXXXXVMS 339
+ + EIM + Q+PV L +E+ GFV+NR+Q+A+L E WRL VMS
Sbjct: 133 QDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIGVNDVDAVMS 192
Query: 338 EGLGMRYAFLGALETAHLNAEGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQL 159
GLG RYAF G ET HLNA G++ Y RY I + +MGP P T K N + E+L
Sbjct: 193 AGLGPRYAFNGTCETVHLNAFGVRDYFKRYAAGI---TADMGPIPDFTDEKVINKLEEEL 249
Query: 158 EKLVPIEKLQDRRNWRDLCLMRLSLLKKEMN 66
E + ++ + R+ L+ ++ LKK++N
Sbjct: 250 EPKMSTLNIRKHQAEREEKLVEIAKLKKDLN 280
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 35.9 bits (79), Expect = 0.028
Identities = 26/106 (24%), Positives = 43/106 (40%)
Frame = -3
Query: 704 KVFQNLDSVVDDNTIXXXXXXXXXXXXXSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPW 525
++F NL+++ I S L+ S ++ H NP + LVEI+
Sbjct: 132 ELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSH 191
Query: 524 TKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 387
T + + E I + PV L FV NR+ + D+ +L
Sbjct: 192 TSSQAIATAFQACESIKKLPV-LVGNCKSFVFNRLLHVYFDQSQKL 236
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.11
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = -3
Query: 581 HPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILD 402
H NP + LVE+V T PE +EI + PV+ ++ GF++NR+ L
Sbjct: 156 HFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVA-AKDTPGFIVNRLLIPYLM 214
Query: 401 EVWRLXXXXXXXXXXXXXVMSEGLGMRYAFLGALETA-HLNAEGMQSYIDRYGETI 237
+ R+ M G Y +G +E ++ + +QS + + ETI
Sbjct: 215 DSIRMLERGDATKEDIDTAMR--FGTSYP-MGPIELCDYVGLDVLQSTLKIFRETI 267
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/106 (22%), Positives = 42/106 (39%)
Frame = -3
Query: 704 KVFQNLDSVVDDNTIXXXXXXXXXXXXXSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPW 525
++F LD + + I S L+ ++V+ H NP + +VE++
Sbjct: 135 ELFTKLDKICKPSCIFGTNTSSLDLNEMSSVLRDPTKVVGIHFFNPANLIRMVEVIYGSK 194
Query: 524 TKPEVAKKTREIMEEIGQQPVSLTREIDGFVLNRIQYAILDEVWRL 387
T + E I + PV L FV NR+ L++ +L
Sbjct: 195 TSSKAVATAFEACRSIKKLPV-LVGNCPAFVFNRLLGVYLNQSQKL 239
>AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 221 EMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRDLCLMRLSLLKKEMNKKYQSS*C 42
E P+P T+ +S NS+ E+ +R R L LS L++E N +
Sbjct: 62 ERFPSPLATSAESVNSIKSSCSSRSSAERETERAQRRQLLNTSLSKLREEANMPLRKHLL 121
Query: 41 VFH 33
+FH
Sbjct: 122 IFH 124
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 602 KSQVIVSHPVNPPYYVPLVEIVPAP 528
K + + PV+PP VP+ IVPAP
Sbjct: 700 KPDPVPAKPVSPPVIVPIDSIVPAP 724
>Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 320 YAFLGALETAHLNAEGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQLEKLVP 144
Y G L A L+ +G + ++ Y ET +++NE ++R S C L P
Sbjct: 375 YRLSGVLLIAQLSTKGSLTALEGYTETAVKIANENRDVISGFITQTRVSACSDLLNWTP 433
>Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 320 YAFLGALETAHLNAEGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQLEKLVP 144
Y G L A L+ +G + ++ Y ET +++NE ++R S C L P
Sbjct: 375 YRLSGVLLIAQLSTKGSLTALEGYTETAVKIANENRDVISGFITQTRVSACSDLLNWTP 433
>AF100307-9|AAC68938.1| 321|Caenorhabditis elegans Hypothetical
protein T12B5.11 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 233 RVSNEMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRDL--CLMRLSL 84
R+ GP N N V + LEKL P+++L+ R+ R+L C+ R +
Sbjct: 14 RIHRSFGPISPTLYNMPINIVDQVLEKLEPMDRLKIRKVCRNLRTCVDRFGI 65
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = -3
Query: 233 RVSNEMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRDLCLM 96
R+ N+ P R N + +C + E + + +D +RD L+
Sbjct: 16 RMYNKQAPTKREELNPTERVICSRFETIFDYDPFKDEYTFRDQALL 61
>U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical
protein C34E10.11 protein.
Length = 255
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 578 PVNPPYYVPLVEIVPAPWTKPE 513
P+ PP L +V APW KPE
Sbjct: 47 PILPPSKKVLYHVVHAPWQKPE 68
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 587 VSHPVNPPYYVPLVEIVPAPWTKPEVAKKTRE 492
VS V P + P+ VPAP KP+V+KK +E
Sbjct: 421 VSAVVPPDGWAPIP--VPAPTKKPKVSKKEKE 450
>AC199170-3|ABO33262.1| 317|Caenorhabditis elegans Hypothetical
protein T08D2.2 protein.
Length = 317
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 369 NNFVVNETPNFIKDCVLNSIQNKSVY 446
N F+V+ TPN + D +++ +N +V+
Sbjct: 38 NQFLVDSTPNHLHDVAIHTCENYTVF 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,137,830
Number of Sequences: 27780
Number of extensions: 345976
Number of successful extensions: 884
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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