Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B22
         (452 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K1Z7 Cluster: Putative uncharacterized protein; n=1; ...    34   1.2  
UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family ...    32   6.6  
UniRef50_Q74BJ6 Cluster: Valyl-tRNA synthetase; n=30; Bacteria|R...    32   6.6  
UniRef50_Q9XVI2 Cluster: Putative uncharacterized protein sys-1;...    31   8.7  

>UniRef50_A5K1Z7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1387

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 19   KKKKNFTMQVQDFNAPGRKIKSVA-NHTFLYWNQINKIYHINI 144
            KKK+NF +Q+ +  AP   IK V+ N  +L W +    +H+ I
Sbjct: 1242 KKKENFAVQINERFAPYINIKRVSMNENYLCWKERRNFFHLLI 1284


>UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3); n=2;
           Murinae|Rep: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3) - Mus musculus
           (Mouse)
          Length = 102

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 182 KCNKNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAW 343
           KC +NM  R +  S    N +S+ ST   +  ++  +  M+ L     SP +AW
Sbjct: 12  KCQRNMFGRSTASSKGSSNSRSSSSTSPKKGPRREADALMEALWQQRGSPPDAW 65


>UniRef50_Q74BJ6 Cluster: Valyl-tRNA synthetase; n=30; Bacteria|Rep:
           Valyl-tRNA synthetase - Geobacter sulfurreducens
          Length = 887

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 34  FTMQVQDFNAPGRKIKSVANHTFLYWNQINKIYHINIFGFMNLDVF 171
           F   +  F A GR IK        Y N +NKI++ + F  MNL+ F
Sbjct: 550 FRFTLAAFAAQGRDIKLAEERIAGYRNFVNKIWNASRFALMNLEGF 595


>UniRef50_Q9XVI2 Cluster: Putative uncharacterized protein sys-1;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein sys-1 - Caenorhabditis elegans
          Length = 811

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 221 SMQPENMQSTQSTPGVRCTQQRPEQYMQQLQGTCSSPAEAWLTRKPGEQRR 373
           SMQP   Q  Q TP    TQQ+ +   QQ +   SSP+ +     P + ++
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAAPAQNQK 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,949,653
Number of Sequences: 1657284
Number of extensions: 4732313
Number of successful extensions: 13656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13650
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)