Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_B22
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   9.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 361 RATKIKYLNILIVCLVRRRVTDG 429
           R+  +K LN+L    +RR+ T+G
Sbjct: 314 RSEVVKILNVLKKIALRRQTTNG 336


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 361 RATKIKYLNILIVCLVRRRVTDG 429
           R+  +K LN+L    +RR+ T+G
Sbjct: 240 RSEVVKILNVLKKIALRRQTTNG 262


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 17  EKKKKTLPCKFRISMRQAE 73
           EK+KK+LP +  + + +A+
Sbjct: 593 EKRKKSLPVRKLLELERAQ 611


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 153 ETKYVDVIYFIYLIPI 106
           E   +D ++ +YL+PI
Sbjct: 127 EEAVIDYLFTVYLLPI 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,016
Number of Sequences: 336
Number of extensions: 1279
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)