Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_B21
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr... 38 0.001
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 32 0.10
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 29 0.74
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 28 1.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.0
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 3.9
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 26 5.2
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 26 5.2
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 26 5.2
SPBC1A4.06c |||mitochondrial matrix protein import protein|Schiz... 25 9.1
>SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/72 (37%), Positives = 33/72 (45%)
Frame = -3
Query: 288 GELFYQSHDSLSKLMEVSCVELDQIVDILRDAPGVYGARMTGGGFGGCAVALVQKSELDA 109
G L S S S EL ++ I A G YGAR TG G+GG AV L +L
Sbjct: 418 GRLLNDSQRSEDIYNNSSSPELREVCKISL-ANGGYGARTTGAGWGGSAVHLTTHDKLAK 476
Query: 108 LKQRILSQYKGK 73
L + + QY K
Sbjct: 477 LVEALTEQYYKK 488
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 31.9 bits (69), Expect = 0.10
Identities = 22/92 (23%), Positives = 34/92 (36%)
Frame = -2
Query: 586 FGSKAGADQNGEYMYTSDQLQREASVDGKRVPSEEGSVSRSGLSTGTDIFEGGKYAGFRQ 407
+ S AGA N + ++S + + D + SR+ GTDI G YAG
Sbjct: 17 YSSSAGAVHNSDEPFSSSGAPQNRNFDTSYTSEIPSNSSRAANDMGTDIGSGDPYAGMTS 76
Query: 406 AERSRL*RVSYQKSSACHRRNSENGGSCQQID 311
+ V +K R + S + D
Sbjct: 77 DTKKGFNSVESRKKEQSDVRGGDTSYSRRHDD 108
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 29.1 bits (62), Expect = 0.74
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -3
Query: 351 GEIQRTVEAASKLTEKNY--KRVGELFYQSHDSLSKLMEVSCVELDQIVDILRDAPGVYG 178
G + V A + ++KN K++GE F + L + + VS +D++ L+ +
Sbjct: 267 GISKSAVLALTSESDKNSSAKKLGE-FIVLNQKLLECLGVSHYSIDRV---LQATKSIGW 322
Query: 177 ARMTGGGFGGCAVALV 130
++TG G GGC + L+
Sbjct: 323 TKLTGAGGGGCTITLL 338
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 384 ELVIRRARHVIGEIQRTVEAASKLTEKNYKRVGELFYQSHDSLSKLMEVSCVELDQIVDI 205
ELV A ++ E Q T +T +N+KR L + S+ + + C +I+D+
Sbjct: 171 ELVREEAACLVAEAQLT-----NITRENFKRAFTLHIGTLLEHSEKVAILCGYAKKILDL 225
Query: 204 LRDAPGVYG 178
L D P V G
Sbjct: 226 LDDTPIVPG 234
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Frame = +3
Query: 132 PKPPHIHR--SHLPSFS-HHTPLEHPGGCPLSDRAPRRIPPSICLASHAIGKKVHPPFCN 302
P PP H H+P HH P EH P+ +PP H G+ + PP +
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPPMH 330
Query: 303 SSRSICWQLPPF 338
PPF
Sbjct: 331 HEPGEHMPPPPF 342
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +3
Query: 132 PKPPHIHR--SHLPSFS-HHTPLEHPGGCPLSDRAPRRIPPSICLASHAIGKKVHPP 293
P PP H H+P HH P EH P+ +PP H G+ + PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPP 275
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +3
Query: 132 PKPPHIHR--SHLPSFS-HHTPLEHPGGCPLSDRAPRRIPPSICLASHAIGKKVHPP 293
P PP H H+P HH P EH P+ +PP H G+ + PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPP 301
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 429 PPSKMSVPVDRPLLDTEPSSEGTRFPSTDA 518
P SK P PLLD +PSS+ + F + DA
Sbjct: 144 PSSKQEGP--SPLLDNQPSSDLSNFNTIDA 171
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 5.2
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = -3
Query: 618 KDHALLIDCKSLEAKQVPIKMENICILVINSNVKHRLTGSEYPXXXXXXXXXXXQLGLTS 439
K ++LL CK+ V + N+CIL + N++ SE P + ++
Sbjct: 42 KIYSLLQICKAENCSAVACRGCNLCILAVQGNIEI----SEEPQKLFQEENVKVYIYDSA 97
Query: 438 LRAANMQDLDRLRDLGCN-ELVIRRARHVIGEIQRTVEAASKLTEKNYKRVGELFYQSHD 262
+ ++++ + +LG +++ RA EI+ + S L K KR E S
Sbjct: 98 ISLSSVRASFPISELGIRMDIIKARAEPREDEIRASF---SSLVNKEIKRTVEELLLSKR 154
Query: 261 SLSKLMEVSCVELDQI 214
S ++L ++ + Q+
Sbjct: 155 STNRLSLLAFMRNQQL 170
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 417 PAYLPPSKMSVPVDRPLLDTEPSSEGTRFPSTDASRWS*SLVYIYSPF*SAP 572
P +P + +++P D + + PS +F S S+ S IYS F + P
Sbjct: 275 PVSVPSNTINIPTDSLSIVSNPSQTPAKFDSNRISQVPNSDYSIYSNFNNFP 326
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 642 QYIVTMGKKDHALLIDCKSLE 580
+Y+V++GK D A+ + CK+ E
Sbjct: 204 RYLVSIGKDDEAIQVMCKNAE 224
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 664 PREVVLCLLTQLGF 705
PREV+LC+L QL F
Sbjct: 140 PREVLLCILQQLNF 153
>SPBC1A4.06c |||mitochondrial matrix protein import
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 359 CRALLITNSLQPRSLSLSKS 418
C L++TN + RSL +SKS
Sbjct: 331 CAELMLTNQISTRSLLISKS 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,334,454
Number of Sequences: 5004
Number of extensions: 74344
Number of successful extensions: 246
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -